Magnolia sinica: 131243492
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Entry
131243492 CDS
T09699
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msin03036
]
131243492
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
msin00535
]
131243492
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
131243492
Meiosis-specific proteins
Cohesin complex and associated proteins
131243492
Proteoglycans [BR:
msin00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
131243492
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
131243492
NCBI-ProteinID:
XP_058098866
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Position
4:complement(99559494..99620507)
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AA seq
1204 aa
AA seq
DB search
MYIKQVIIEGFKSYKEQIATEPFSPKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED
RHALLHEGAGHQVVSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDTKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIQVVQYLEERLRELDEEKEELKKYQQLDKQRRSLEYTIYDKELHDARQKLG
EVEEARTKVSEKSKNMYDSVLDAHDKFKQLEKEFKSLTKDIQGLNKEKEAMEKRRTERIK
THAQIEFDVKDLGEKISGDIRAKEEAVKQLESLKREIEESRCELDEIRPAHEAQVIKEEE
ITKEIMDREKQLSILYQKQGRATQFSSKGARDKWLQKEIDDLQRVLSSNLVQEKKLQDEI
QQLDDELKERDIYIEGRKADLQKQESLISKCLEDFSSLKIQRDELQDTRKSLWKKESDLS
ADIDRLKADVVKAEKSLDHATPGDIRRGLNSVRRICRDHNIGGVFGPIFELIDCEDRFFT
AVEVTAGNSLFHVVVETDEISTRIIRYLTAEKGGRVTFIPLNRVKAPHVAFPHRADVVPL
LKRLKFSSVYAPAFAQVFGRTAVCKDLDVATKVARSDGLDCITLEGDQVSKKGGMTGGYY
DDRRSKLKFMNIIRQNTMSINTKEVELEKIRNFSPQIDQKITRLVSEQQKMDAKRSHDKS
ELEQLKQDITNANKQKASIFKAREKKEKLLTNARGQIDQLKAGITMKKAEMGTDLIDHLT
PEEKKLLSRLNPEITKLKEKLIECKTNRIETETRKGELETNLATNLVRQEQELLSIIDSG
DDTTSSAELEQKRQELKEAKASVNEATQQLKGVVEKIDSLTKKTRGIKNAKDELKALEDN
YERTLQDEAKELEQLVNKRTILLQRQEDFMKKIRDLGSLPSDAFDMYKRKSIKELQKTLH
KCNEQLKQFSHVNKKALDQYVNFTEQREELQKRQAELDAGDEKIRELISVLDQRKDESIE
RTFKGVARHFREAFSELVQGGHGFLVMMKKKDGEVGDDDYDEDGPRDADPEGRVEKYIGV
KVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIRRLADMANTQFITTTFRPELVKVADKIYGVTHKNRVSRVDVVSKEEALDFIEHDQS
HQTD
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaagcaggttattattgaagggtttaagagctacaaagaacaaatcgcaaca
gaaccgttcagtccaaaagtcaattgtgttgttggtgcaaatggttctgggaagacaaac
tttttccatgcaatacgtttcgtccttagtgacctcttccagaacctgcgcagtgaagat
aggcatgcccttctccatgaaggagcaggccaccaagtggtgtcagcctttgtggagata
gtgtttgataattctgacaatcgcatcccagttgacaaggaagaagtgcgcttgcgcagg
acaattggtctgaaaaaagatgaatatttcctggatacaaaacacatcacgaaaacagaa
gttatgaatttgctagagagtgctggtttctctcgctccaatccatattatgttgttcag
caagggaagatagcgtcgttgacattaatgaaagactcagaacggctggacctgctgaag
gaaattggtggcacccgagtttatgaggagagacgtcgtgagagtttgaaaattatgcaa
gaaactggtaacaagaggaagcagataattcaagttgttcagtatttggaggagaggttg
agagagctggatgaagagaaggaagaactgaaaaaatatcagcagctcgacaagcagcga
cggtccctagagtataccatttatgacaaggaacttcatgatgctaggcagaaattaggg
gaggttgaagaggctcggaccaaggtttctgagaagtcaaagaatatgtatgatagtgtg
ctggatgcccatgacaagttcaagcaattggagaaggagtttaaatctttgaccaaagat
attcaaggtttgaacaaagagaaagaggcgatggagaagcggcgaactgaaaggataaaa
acgcatgcacagattgaatttgatgtcaaagatttgggagagaaaatttctggggatatc
cgagcaaaggaggaggctgtgaagcagcttgagagcctgaagagagaaattgaggaatcc
agatgtgaacttgatgaaatcagacctgcacatgaggctcaagtgattaaggaggaggaa
attacaaaagaaataatggatcgtgaaaagcagcttagtatcttataccaaaaacaaggg
cgtgcgacccagttttccagcaaaggtgctcgagacaagtggcttcaaaaggaaattgat
gaccttcaacgtgttctttcatcaaatttggtgcaggagaagaaacttcaggatgaaatt
caacagcttgatgacgaattgaaagagcgagacatatacattgaaggacgcaaggctgac
ttgcagaagcaagagtctctcatctccaagtgtcttgaagattttagtagtttgaagata
cagagggatgaactacaagatactcggaagtctttatggaagaaagagagtgacctctct
gctgacattgataggctgaaagcagatgttgtgaaggcagagaagagcctggaccatgct
actcctggtgatattagaagaggtttgaattctgtcagaaggatttgccgggatcacaat
attggtggagtgttcggtccaattttcgagttgattgattgtgaagatagattcttcact
gcagttgaagttaccgctggaaatagcttatttcatgtggtggttgaaacagatgaaata
tcaacgaggataattagataccttactgcagaaaaaggtggaagggttacttttatacca
ttgaacagggtgaaggctccccatgtagcatttccacatcgtgctgatgtggttcctctg
ttaaagagactgaaattctcttctgtttatgctccagcttttgcacaggtctttggtaga
acggcagtttgtaaagatttagatgtggccacgaaggttgctcgctctgatggtctggat
tgcatcactttggaaggtgatcaagtaagcaagaaaggtggcatgacaggaggatattat
gatgataggcggtccaaactgaaatttatgaatataattaggcagaatacaatgtctatc
aacacgaaggaagtggaactcgagaaaattagaaacttttccccacagatagaccagaaa
attactagattggttagtgaacaacagaaaatggatgccaagaggagtcacgataagtca
gagttggaacaacttaaacaggatattacgaatgctaataagcagaaggcgtccattttc
aaagctcgtgaaaagaaggaaaaattgcttacaaatgcccgtggtcaaattgatcagctc
aaagctggcattactatgaagaaggctgagatgggaacagaccttattgatcacttaaca
ccagaggaaaaaaaacttctttcacgtttgaatcctgaaattacaaagctgaaagagaag
cttattgaatgcaaaacaaaccgcatagagactgaaactagaaaaggcgagctagagact
aatctggctacaaaccttgtaaggcaagaacaagagttgctatccataattgactctgga
gatgacacaacatcatctgcagaattagaacagaaaaggcaggaattaaaggaagctaaa
gcatctgttaatgaggcaacacagcagctcaaaggggttgtggaaaagatagacagtctc
acaaagaaaacaagggggattaaaaatgccaaagatgaattgaaggccctagaagacaac
tatgagcgtacacttcaggatgaagccaaagaattggaacagttagtaaataaaaggacc
attcttcttcagaggcaagaagattttatgaagaaaatcagggatttgggttcattgcca
tctgacgcttttgacatgtataagaggaagagcatcaaagagctgcagaagacgcttcac
aagtgcaatgagcaactaaagcagttcagccatgtcaacaagaaagcacttgaccaatat
gttaatttcacagagcagcgagaagagctacagaagaggcaagctgaactggatgcaggt
gatgagaaaattagagagctaatttcagtcttggatcaaaggaaggatgaatcgattgaa
cggacatttaaaggtgtagctaggcatttccgagaagcattctctgagcttgttcaaggc
ggccatggtttcttggttatgatgaagaaaaaggatggtgaagttggtgatgatgattat
gacgaggatgggcctcgtgatgcagatcctgagggaagggttgaaaaatacataggtgta
aaagtgaaggtttctttcactggacaaggggagactcagtcaatgaagcaactatctggt
ggtcagaaaaccgttgtggcgttgacactgatctttgccatacagcgttgtgatcctgca
ccattttatctatttgacgagattgatgcagcattagatccccagtacagaactgctgtt
ggaaatatgatccgccgcctggctgacatggctaatactcaatttattaccactacgttc
cggccagagcttgtaaaagttgcagataagatatacggggtgacacacaagaacagagtc
agccgtgtcgatgttgtttccaaggaagaagctctagattttatcgagcacgaccaatcc
caccaaaccgactaa
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