Magnolia sinica: 131243985
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Entry
131243985 CDS
T09699
Name
(RefSeq) nuclear pore complex protein NUP62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
msin
Magnolia sinica
Pathway
msin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131243985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131243985
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131243985
BRITE hierarchy
Motif
Pfam:
Nsp1_C
DUF6306
TMPIT
Prefoldin_2
Motif
Other DBs
NCBI-GeneID:
131243985
NCBI-ProteinID:
XP_058099630
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All DBs
Position
4:complement(115410047..115426006)
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AA seq
835 aa
AA seq
DB search
MAGTGFSSASSSSSTFPFLQASSFSSSSSTTSSSPFAPYSQQSSSPFSFSSSPLSSFSSS
SSNSSSSSSSPFSFGTSFASSNPLSSSASNLFSSSTSKPLSFPFPSASNPGSTSASALPS
SSTSLFAFSTSATGSSLFSAPSSTSVPASSPFAFSTSATGSSLFSAPSSTSVPASSPFSA
SLFGTPSSSAGSSLFSAPSSTSAPASSPFSTSTFGGPTSSPLFGSSSSSSPPVFGSSSSY
SSSTITTPSFSTGTSFFGTASSSSSPLFGSSSSSSSTTMAPPFSTSSQLFGSSSATVATP
SFSTSSPLFGSSSAAVTAPSFSTSSQLFGSSSAAATPPSFSGSSSLFGSSAAAMAPSFST
SSQLFGSSSATATAPSFSSSSSLFGSSSAATTASPFSLGSASAFSKSSTNAASTAAPSST
PALNSSSSSFSFSTSSSSPFQSSLGLGNAATAASSSAAGFSSTAAAKPFSLAFGASSFPS
LSSTVTTGSLSVPAASTPPSSSAPSPFSSSAPAASTPSVPAFGANPTVATMGTALSSAAT
TSAASSASANAFPSFSLSTRAPVSASSSPLQASTSAAPLFGASTSTSAGVSTEGAAKISF
SGSVVTTAQASSSASAASSASTTLSQAPKLPSEITGKTVEEIIKDWNSELQERTGKFRKQ
AVAIAEWDRRILQNRDVLLRLESEVAKVVETQTNLERQLELIETHQQEVDKALQSAEEEA
ERIYKDERRLLLEDEAAATRDSMYEQAEFIEREMEQMAEQIKSIIETLNGNQGGDLEMID
GMTPIDVVVRILNNQLSSLMWIDEKASEFSSRIQKLANRGAAADRDLMSSRFWMS
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggctggtactggcttctcatcagcctcctcctcctcttccacattccccttcttacaa
gcttcatctttttcttcctcttcttcaactacatcttcctctcccttcgctccctattct
caacaatcctcctctcctttctccttctcctcctctcctctctcatcattctcttcatcc
tcttcaaactctagctcctcttcttcttctcctttctcctttggaacctctttcgcttct
tcaaaccccctctcctcttctgcttccaatcttttctcctcatcaacttccaaacccctt
tccttcccatttccctccgcatcaaatcccggctccacgtccgcttccgcgctaccatct
tcctcaacttcgcttttcgcattctccacatcggccactggatcatcgctcttcagcgct
ccctcatcaacctcagttcctgcatcctcgcctttcgcattctccacatcggccaccgga
tcatcgctcttcagcgctccctcatcaacctcagttcctgcatcctcgcctttctctgct
tccttgttcggtactccctcttcttccgctggatcatcgctcttcagcgctccctcatca
acctcagctcctgcatcttcgcctttctctacttccacgtttggtggtcccacttcttcc
ccattgttcggatcttcttcctcttcttcgccgccagtgttcggatcttcttcctcctat
tcttcttcaacaattacaactccgtccttctctactggcacgtctttcttcggaactgct
tcttcttcttcttctccattgtttgggtcttcttcttcttcttcttcgacaactatggcc
ccgcccttttctacttcttcgcagttgttcggatcctcttctgccacggtggcgactcct
tccttttctacttcttcgccactgttcggatcttcttctgccgcagtgacggctccttcc
ttttctacatcttcgcagctgttcggatcttcttctgcagcagcgacgcctccttccttt
tctggctcctcctcactgttcggatcttctgctgctgcgatggctccttccttttctact
tcttcgcagctgtttggatcttcttctgccacagcaacagccccttccttttcttcttct
tcgtcgttgttcggatcttcttctgctgcgacgacagcttcgccgttttctcttggcagt
gcttcagcattttctaagagctccacaaatgcagcatctacagccgctccttcatcgacg
cctgctctgaactcatcatcgtcaagcttttccttcagtacttcctcgtcatcgcccttc
caatcctcccttggtcttggcaatgctgctactgctgcttcttccagtgcagcagggttc
tccagtacagctgctgcgaagccgttttcgctagcatttggagcttcttcctttccgtca
ctctcgtcaactgtcacgaccgggagcttgtcagttccagctgcttccacaccaccatct
tcgtctgctccatctccattctcttcttctgctcctgcggcttctactccatctgttcct
gcttttggagcaaaccctacggtggcaacgatgggaacagctttatcatcagcagctacg
acctcagctgcttcctcagccagtgccaatgcctttccaagcttctcgctgtctacgaga
gcacctgtatcagcatcgtcatcaccactccaggcatcaacatcagctgctccgttattt
ggtgcttctacttcaacatcggcaggtgtatccactgaaggtgcagcaaaaatcagtttt
tctggttctgttgtcactacagctcaggcgtcgtcttctgctagtgctgcttccagtgcc
agcacaacactatctcaggcgccaaagttaccatctgagatcaccgggaaaaccgttgag
gagatcatcaaagattggaactctgagctgcaggagcgcactgggaagttccgaaagcag
gctgtggccatagctgagtgggataggaggatcttgcagaatagggatgttctccttagg
ctcgagagcgaggtggctaaagtggttgagacacagactaacttggagcgacagttggag
ttaattgaaactcatcaacaagaggttgataaggcattgcaaagtgcggaagaagaagct
gagcgtatttacaaggatgaacgtcgattgcttcttgaagacgaggctgcagcaacgaga
gattcaatgtatgagcaggcggagttcattgagagggagatggaacagatggcagaacag
attaagtcaattatagagaccttgaatgggaatcagggtggtgaccttgaaatgattgat
ggcatgactcctattgatgttgtcgtccggattctaaacaatcaactcagttcactgatg
tggattgatgaaaaggctagtgaattctcttcccgtattcagaaactggccaaccgtggt
gctgctgctgatcgagatttgatgagttcaagattttggatgagttga
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