Magnolia sinica: 131244333
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Entry
131244333 CDS
T09699
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like
KO
K10752
histone-binding protein RBBP4
Organism
msin
Magnolia sinica
Pathway
msin03082
ATP-dependent chromatin remodeling
msin03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131244333
03083 Polycomb repressive complex
131244333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msin03036
]
131244333
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
131244333
Histone modification proteins
HAT complexes
HATB complex
131244333
HDAC complexes
Sin3A-HDAC complex
131244333
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
131244333
PRC2.2
131244333
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
131244333
Heterochromatin formation proteins
Other heterochromatin formation proteins
131244333
Chromatin remodeling factors
NuRD complex
131244333
NuRF complex
131244333
NuRF complex (fruit fly)
131244333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
WD40_RFWD3
EIF3I
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
Beta-prop_HPS5
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
131244333
NCBI-ProteinID:
XP_058099947
LinkDB
All DBs
Position
1:31161986..31195840
Genome browser
AA seq
424 aa
AA seq
DB search
MAKDDDEFRGEVEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVQWLPGREEPPGKD
YSVQKMVLGTHTSENEPNYLMVVQVQLPLEDAENDARQYDDDRGEVGGFGCTNGKVQIIQ
QINHDGEVNRARYMPQNPFFIATKTVSAEVYVFDYRNHQSKPPLDGACNPDLRLRGHNTE
GYGLSWSVFKQGHLLSGSDDAQICLWDVNTTPKNKVLEAQQIFKVHEGVVEDVAWHLRHE
NLFGSVGDDHHLLIWDLRSPSANKPSQSVVAHQGEVNCLAFNPFNEWVVATGSNDKTVKL
FDLRKINTALYTFDCHKDEVFQVGWSPKNETILASCCLGRRLMVWDLSRIDEQQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENIYHDEDDLPGDES
TKAP
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagacgatgacgaattccgaggcgaggtcgaagagcgcctcatcaacgaggaa
tacaagatctggaagaagaacacgcccttcctctatgacctcgtcatcacgcacgccctg
gaatggccgtcgctgaccgtgcagtggctgccgggccgcgaggagccgccggggaaggac
tactcggtgcagaagatggtgctcgggacccacacgtcggaaaacgagcctaattacctg
atggtggtccaggtgcagctgccgcttgaggacgcggagaatgacgcccgtcagtatgat
gacgacagaggcgaagttggtgggtttggatgcaccaacgggaaggttcaaataattcag
cagataaatcatgacggagaggttaaccgagctcgctatatgcctcaaaatccttttttc
attgcaacaaagacagttagtgcggaggtgtatgttttcgactatagaaatcatcaatct
aagcctcctctagacggagcatgcaatcctgatttgaggctgagaggccacaacacagaa
ggctatggtctttcttggagcgttttcaagcagggacatctactgagtggttctgatgat
gctcagatatgcttgtgggacgtcaacacgactcctaaaaacaaggttctcgaggctcaa
cagatttttaaggtccatgaaggtgttgttgaagatgttgcatggcatttgaggcatgaa
aatctgtttggttcagtgggtgatgaccaccacctacttatatgggatcttcgatcgcca
tcagcaaacaaaccaagccaatctgtagttgctcatcaaggtgaggttaactgcctagca
ttcaatcccttcaatgagtgggttgtagcaacaggttcgaatgataaaactgttaagctg
ttcgacctccgcaagataaatactgctctctatacctttgattgtcacaaagacgaggtt
ttccaagtaggatggagtccaaagaatgagacaatattagcatcttgctgtcttggaagg
aggctcatggtgtgggatctcagcaggatcgatgagcagcagacgccagaggatgctgaa
gatggcccaccagagttgctgttcattcatggtggccacaccagcaaaatttcagatttc
tcatggaatccgtgcgaggattgggtcattgccagcgtggccgaagataacatccttcaa
atctggcaaatggctgagaatatctaccacgacgaagatgatctacctggtgatgaatcc
accaaggctccatga
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