Magnolia sinica: 131244424
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Entry
131244424 CDS
T09699
Name
(RefSeq) pectate lyase 1-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msin
Magnolia sinica
Pathway
msin00040
Pentose and glucuronate interconversions
msin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131244424
Enzymes [BR:
msin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131244424
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
131244424
NCBI-ProteinID:
XP_058100011
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Position
4:27192734..27195693
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AA seq
390 aa
AA seq
DB search
MTSGGPPMIIIISKHLGLSLLLFLFLANATAAVRAKSPGMNIIDQCWRTNQNWARNRQQL
ATCSIGFAGKMTNNVGRGLTVYTVTDASDDPMKPRQGTLRYGATMLKGKVWIKFQKDMQI
KLEKPLLISSFTAIDGRGANVHIAHGTCFLLHEVTNVIIHGLHFHHCHKPNPGPVIGPGG
KIVQLGRQDGDAIAIVGSTKIWIDHNTLYECHDGLLDVTRGSTDVTISNNWFNNHDKVML
LGHDDGFVMDKRMRVTVIFNRFGPNCHQRMPRVRHGYAHVTNNLYQGWGMYAIGGSMNPS
IRSEANLFIAPKSSNKAVTWREGGKGSGKSWNWQSVNDHFVNGAYFKQTGSGGVAPRYNR
YQRFKIASAGAVRTLTRSSGALRCFTRYRC
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaggaggcccacccatgatcatcatcatctccaagcacttgggcctctctctt
cttctctttctcttcttagcaaatgccactgctgctgtaagggcgaagagccctggcatg
aacatcatcgaccaatgctggcggacaaaccagaactgggccaggaacaggcaacagcta
gcgacgtgctcgattgggttcgcaggcaaaatgacaaacaatgtgggtcggggtctgacg
gtatacacggttacagacgccagcgatgacccgatgaagcctcgccaggggacgctgcgc
tacggagcaacgatgctaaaaggaaaggtttggattaagttccagaaggacatgcagata
aagcttgagaagccacttctaatcagtagcttcacagccattgatggccgtggggcgaat
gtccacatcgcccatggcacatgcttcttgcttcatgaggtgaccaacgttatcatccat
gggctccacttccaccactgccacaaacccaatcccggcccagtgatcggtccaggaggg
aagatcgtgcaattgggaaggcaggatggcgatgccatcgccatcgttgggtccacgaag
atctggattgaccataacaccctctacgaatgccacgacggtctcctagacgttacccgt
ggatcgacagacgtgactatatcaaacaactggttcaataaccatgacaaggtgatgctt
ttgggccacgatgacgggttcgtgatggacaagagaatgagagtgacagtgatcttcaat
cgctttggccccaattgccatcaacgaatgcccagggttcgacatgggtatgctcatgtc
acaaacaatctctaccaaggctggggaatgtacgccatcggcggaagtatgaatcccagc
attagaagcgaagcaaatctcttcatagctccgaaatccagcaacaaagcggtaacatgg
agggaaggagggaagggaagtggaaagtcatggaattggcagtcagtgaatgaccacttt
gttaatggagcttacttcaaacagactggtagtggtggagtagccccacgatacaaccga
taccaaagatttaaaattgcaagtgctggggcggtgaggacattgacaagatcttcaggc
gccctgcgttgctttacaagatataggtgttga
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