Magnolia sinica: 131245190
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Entry
131245190 CDS
T09699
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
msin
Magnolia sinica
Pathway
msin04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131245190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msin04121
]
131245190
Enzymes [BR:
msin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131245190
Ubiquitin system [BR:
msin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
131245190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
131245190
NCBI-ProteinID:
XP_058100452
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Position
5:complement(4377707..4387606)
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AA seq
323 aa
AA seq
DB search
MDLDAIECISSSDGIDDDDSTITTTVQHHHHTFSKTHHSNNSSNVSSVIPPTSSVHELLE
CPVCTNSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCK
YFSLGCPEIFPYYSKLKHEGQCSFRPYNCPYAGSECSIVGDIPSLVTHLKDDHKVDMHTG
CTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDESEA
RNYTYSLEVGGNGRKLVWEGTPRSIRDSHRKVRDSHDGLIIQRSMALFFSGGDKKELKLR
VTGRIWKEQQNPDGGACIPNLCS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggatttggatgccattgaatgcatttcatcgtctgatgggatcgacgatgatgattct
accattacgacaacggtccagcatcaccaccatacattctccaagacccaccacagcaac
aattcctccaatgtctcttcggtgattcctccgacgagtagcgtccacgagctgctcgaa
tgccctgtctgcaccaattccatgtacccaccaatccatcagtgccacaatgggcatacg
ctatgctccacctgtaagtctagggtccataaccggtgccccacttgcaggcaagagctc
ggcgatatcaggtgtttggcgctggagaaggtggctgagtcgctcgagctcccctgcaag
tacttctcactaggctgcccggagatcttcccgtactacagcaagctcaagcacgaaggc
cagtgtagtttcagaccatacaactgcccgtatgcaggatctgaatgctccattgttggt
gatattccttcactcgtcacgcatctgaaggacgaccacaaagtagatatgcacactggg
tgcacgttcaaccatcgctacgtcaagtccaatcctcgcgaggtcgaaaacgcaacctgg
atgctcacagttttccattgtttcgggcaatacttctgcttgcactttgaggccttccag
ctcgggatggcgcctgtgtacatggcgtttcttcgcttcatgggcgatgagtctgaggcc
cggaactacacttacagccttgaggtggggggcaatgggaggaagcttgtgtgggagggc
accccacggagcatccgcgacagccaccggaaggtccgcgacagccacgatggactcata
atccagaggagcatggcccttttcttctccggcggcgataagaaggagctgaagttgcgt
gtcactggccggatatggaaggagcagcagaacccggatggcggggcgtgcataccaaac
ctatgtagctga
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