Magnolia sinica: 131245205
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Entry
131245205 CDS
T09699
Name
(RefSeq) protein HEAT STRESS TOLERANT DWD 1-like
KO
K14848
ribosome assembly protein RRB1
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msin03009
]
131245205
Ribosome biogenesis [BR:
msin03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
131245205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
CAF1C_H4-bd
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_SPT8
NBCH_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR35_TULP_N
PALB2_WD40
R3H-assoc
Motif
Other DBs
NCBI-GeneID:
131245205
NCBI-ProteinID:
XP_058100486
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All DBs
Position
5:4793157..4812924
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AA seq
470 aa
AA seq
DB search
MVRSLKNAKKTKRKNRAPKTEEGPSNPAKVWQPGVDKLEEGEELQCDPSAYNSLHGFHIG
WPCLSFDIARDSLGLVRTEFPHSVYCVAGTQAEKAGWNYIGIFKLCNISGKRRELLPTKS
VGSDVDMDDSDSSSSDEEDENDGPGGSEPPSLQLRKVAHEGCVNRIRSMTQQPHICATWA
DNGHVQVWDFTSHLNTLAETEAGISTGASSISSQAPLIKFSGQKDEGYAIDWSPVAPGRL
VSGDCNNCIHLWEPCTGGTWKVDTNPFIGHTASVEDLQWSPTEADVFASCSVDGTITIWD
IRVGRSPAVSVKAHNADVNVISWNRLASCMIASGSDDGSFSIRDLRLIQGDSLVAHFEYH
KHPITSIEWSPHEPSTLAVSSSDNQLTIWDLSLERDEEEEAEFKAKMKEQVNAPQDLPPQ
LLFVHQGQKDLKELHWHAQIPGMLISTAGDGFNILMPSNVETTLPSANDR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggttcgcagtctaaaaaatgctaagaagacgaagcgcaagaacagagccccgaagacg
gaagaaggtccctccaaccctgccaaggtatggcaaccgggcgttgacaaattagaagag
ggagaagagcttcaatgcgatccttcggcttacaattctctccatggcttccatatcggg
tggccctgcttaagcttcgacatagcacgcgattcgctgggattggtacggacggagttc
ccacattcggtgtactgtgtcgccgggactcaggctgagaaagctggctggaactatatt
ggaatatttaagctatgcaatatatctggaaaaaggcgtgagttgttgcctactaaatct
gttggtagtgacgttgatatggatgatagtgatagcagcagtagtgatgaggaggatgag
aatgatgggcctggtggatccgagccacctagtttgcagctgcgcaaggtggcccatgaa
ggatgtgtaaaccgcatacgctcaatgacccaacaaccccatatatgtgcaacatgggca
gataatggtcatgtgcaggtctgggacttcacctctcatctaaatactctagcagagaca
gaagcgggaattagcacaggagcaagttccatatcttctcaggcacccttaattaaattt
agtgggcaaaaagacgagggatatgcaatagactggagccctgttgctcctgggaggctc
gtctctggtgattgcaataattgtattcatctttgggagccttgtactggcggaacttgg
aaggttgatacaaatccatttattggacatactgcgagcgttgaagatctgcaatggagt
cccacggaagccgacgtctttgcatcttgttctgtggatggaactattacgatatgggac
atccgtgttggaagatcgcctgcagtttctgtaaaggcacataatgcagatgtcaatgtt
atctcatggaaccggttggctagctgtatgatagcttctggaagtgatgacggctcattc
tctattcgtgatcttcgattgattcagggagattcacttgtggctcatttcgaataccat
aagcaccctatcacatccattgagtggagcccacatgagccctccactttggctgtttca
tcgtcagacaatcagctaacgatttgggatctttcattagaaagagatgaggaagaagag
gctgaattcaaagcgaaaatgaaagagcaagtgaatgccccccaagatttaccacctcag
cttctctttgttcatcagggtcagaaagacttgaaggaattgcactggcatgctcagatc
ccagggatgctcatatctacggcaggtgatggtttcaacattttgatgccctcaaacgtt
gaaacgactcttccatcagccaatgatcggtag
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