Magnolia sinica: 131245220
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Entry
131245220 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131245220 isoform X1
KO
K24155
rabconnectin-3a
Organism
msin
Magnolia sinica
Pathway
msin04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
131245220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131245220
Membrane trafficking [BR:
msin04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
131245220
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
131245220
RAVE complex
131245220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WDR55
Beta-prop_WDR5
Beta-prop_WDR3_2nd
Beta-prop_EML
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_IFT140_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
131245220
NCBI-ProteinID:
XP_058100510
LinkDB
All DBs
Position
5:complement(5149034..5186983)
Genome browser
AA seq
2587 aa
AA seq
DB search
MSPASKEMPGTSSSRTEENATTEIEYISSILPLELIKSQKIPPSPNRSDSSIDFLLDFSG
FSWIAFGASSLLVISHFPSPLSHQETLTGPIFRQVIELPCGGSGPTIVNAVAWSPSRPSD
GEIAAASENRICLYSADSGSANGSFCWRQIAGFLQSSTVEAIKWTGSGDGLIAAGIEVVL
WKKKNKAWELAWKSRTELPQTLVSATWSIEGPSATAIHALLYSSDSHVEESSSLSREASK
RVLVYHGDGKSGFVKVELCHPQPVSMIQWRPSTVAPTKKDDSHSWRDVLLTCCLDGTVRL
WCEIDSGKARKSAKDITDQKTRRGSFHVAAIIEINQPLKGTLGMDTFITWAMEIRDTIGK
TATQGSEYDMVGKCEWLIGVGPEASLIFWAIHCLDDISPLRFPRVTLWKKKGLLEFKSGH
LCNTGKLNSRNQPMLLRAIISRNRLFGPPTTCSLLQLLPDNSISWSHLYSPALSNSGEGS
SDKISNENTLSCFAEKVISQAGPTGNILQVAVHPYSCEVELAVSLDSNGFLLFWSLSTTS
SCILSMPALVHPTWKPLGRIFTQDVSSVKYSTLKWAPSVFSEKQFLLMGHVGGIDFLIIK
ISESDGDKIIYHKICTIPFPTRTHESGPDHIFATSLSPTCCQNFISNSFMLFGIWMKDFQ
ALSWKVVLHSDDLHGSSCQCGFDAGSVVTSEAWRYESTFDGRRYHVIAQPCSSKIPDPHN
HDQVTAVAVVCPDNLIPSIQQKWASSSDLCSNTSLYNMATGCSDGSLKLWRIGHVVSSIP
PSELASLSWELVGMFMAHQGPVSGISLSSCGSKIATISMGAPNSVSTLHIWESICLTGAG
SFLLEDTVLLNEAVIAFDWLAVGNGQLLLGVCMRNELCVYAQKRLVGQIGVKSEKLSEMH
IWFCIAFCHTSPAAQGFLWGPRSTLILVHDMYFSLFSQWSACTDTKHQPKFYPECTTNHP
SHYVGDVNEDLLCAIYTDRDLCNMKESSVDVKCELRPPVNTNFKKYSGLCNFCLTLSRQQ
YEYGTKSGLHSMLEIGEKLRGALPIYHPEALFLYLHSGNWKRAYVAVQHLVEYLNSDETS
ATCSKDHSCGKSPLVIPQIQLSQYFGELSSTTACDKGLHWGGISSTVSQRSLFQLVDGNS
VANAQSNVFVATSGKFEVTGFLRSLEKSHVTTAMTNTERTQILAMIDLLGEISDSLYASA
YESFDEPGRRFWVAVRYQQLYILRKFGRLAAAEELIVDSGSIVWAFQSDCQDNLFSSFLS
NEPSWIEMRNLGVGFWFTNVAQLRTRMEKLARVQYLKKKDPKDCALLYLALNRLQVLTGL
FKISKDEKDRPLVGFLSRNFQEEKNKAAALKNAYVLMGKHQLELAIAFFLLGGDPSSAVT
VCAKNHGDEQLALVICRLVEGYGGPLERHLISNFLLPTAIEKEDYWLASLLEWVLGNYSH
SFQHLLGFEMDSTVDKLAIPSNRAALSDPSIGQYCVLLSAKNNMKNSVGECTAAMLARWA
TWMTASALNRCGLPLEALECLSSASSTLDSKDQDSLSDSGKLSTLNEILKPSMHEASSWL
SGDVTWHLESRAKLNLAMQFVSKSIMEHPSWLSGAPACSYDAHQYELLLEKFEQMLNMGL
AILEQKYSLESVDLMNMIIKFACNNGLLFLGYSMLHGYTSREHPHDEQHGYTSQLHLHDE
QHASDSSMLCPPLPKLFLKASKEVSGLLVRYIVACSITRSALRPTLPVRNVFGEVRFGRF
HPWDFYLQDVMCSMGSLRPLLKLYGSGFLTKDLTVKSFTVLDILEYCVCFASAWSQGNWK
TLFLMIQPILIASRGGHSPSEIKLADLKRSLLQAAESMVHVTSSDSEGNIPASNSQQQQH
TQSESVMLSIPEDEKWQLIGVCLWRHLSNLCNSHLNTLMADLGNSFSSSVPLCEGSSLQS
SSANYQSDITSMLELIKLFPALLAKLIKDTVGYISSSLAKQLASFLGQKVEKGLPAPTLV
LLEASSQSEQRPPHDCIKQGIDSLQINNENGAYFFEILWEICVDPKAIHESFIHEKLLFP
SVGQKPSKGWLDIHKAITDEYENGDTIHTDQVRISSSAICEAGFHARTRSSDSSQGTGRK
DSSLLTDVTSFRNPKEIYKKNGELLEAMCVNSINQQQAALASNRKGLIFFNLKVEPFRVP
AEYIWSESDWPENGWAGSESTPIATFISPGIGLGSKKGAHLGLGGPTVGRGSLARPGKDL
TGGGAFGIPGYAGVGASGFGWGEQEDFDDFVDPPATVENIKTRALSSHPSRPFFLVGSSN
THVYLWEFGKGRATATYGVLPAANVPPPYALASISALQFDRCGHRFATAALDGTLCTWQL
EVGGRSNVHPTESSLCFNSYASDVGYVAASGSILATAGYSPNGVNLVIWDTLAPPATSQA
SVICHEGGARSLSVFDNDIGSGSISPLIVTGGKGGDIGLHDFRYIATGRTKRHRHLNEQN
MRSSSAHNMQSGTSNKFGEQNRNGMLWHIPKAHQGSITKISTIPNTSLFLTGSKDGDVKL
WDVRGSEVDLVFHWQNMHDRHTFLQPSSRGFGGVVRQVAVTDIVVLSHGFLTCGGDGYVR
MVQIKDA
NT seq
7764 nt
NT seq
+upstream
nt +downstream
nt
atgtctccggcaagcaaagagatgccaggaacaagcagctcgagaaccgaagaaaacgcg
actactgaaatcgaatacatctccagcatcttgccccttgaactcatcaaatcccagaaa
atccctccttctcccaatcgctcagactcctcgatcgacttcctgcttgatttctctggc
ttctcatggatcgctttcggcgcttcttctctgctcgtgatctctcacttcccttctcct
ctctctcatcaagaaaccctaaccggccccatcttccgacaggtgatcgagctgccatgt
ggcgggtccggacctaccatcgtgaatgcggttgcctggtctccgtctcgtccgtcggat
ggcgagatcgcagcagcatccgagaatcggatttgcttgtattctgctgattccggaagc
gcaaacggttctttctgttggaggcagattgccggttttctgcaatcttctacagtggag
gccataaaatggacaggatcaggggatggattaattgcagcgggaatcgaggtggtcttg
tggaaaaagaagaacaaagcctgggaattagcttggaaatcaagaacagaactgcctcaa
actctggtttctgcaacatggtctattgaaggaccttctgcaacagccattcatgcattg
ctttattctagtgattcccatgttgaagaatcctcttctttgtctagggaagcaagcaaa
cgtgtattagtctatcatggtgatgggaaatctggatttgtgaaagtagagctctgtcac
cctcagccagtttcaatgattcagtggaggccgtcaactgtagcaccaacaaagaaggat
gattcacattcatggagggatgtgctgctgacatgttgtttagatgggactgtgaggttg
tggtgcgagattgatagtgggaaggctagaaaatccgcaaaggacataactgatcagaag
acaaggagaggatcattccatgttgctgctataattgaaattaatcagcccctaaaagga
actcttggcatggatacttttataacatgggccatggaaatcagggatacaattggtaaa
actgccacgcaaggttctgagtatgacatggttggcaagtgtgagtggttaattggggta
ggccctgaagcatcacttattttttgggccatccattgccttgatgacatatccccatta
cggttcccacgagtgactttatggaagaaaaaaggtctacttgaattcaaatctggacat
ctttgtaatactggcaagttgaattctcgtaaccaacctatgcttctgagagctattatt
tcaagaaaccgactctttggtccaccgaccacatgctctttgcttcagttattacctgat
aattccattagctggtcacatttgtatagtcctgcattaagcaactcaggagaaggatct
tcagataaaattagcaatgagaataccttatcatgttttgctgagaaagttataagtcaa
gctggtcccactggaaatattttacaggttgcagtacatccttatagttgtgaggttgaa
cttgctgtttctttggattctaatggtttccttctgttctggtcactttctaccacttcc
agttgcattttgagcatgccagcgttagttcatcccacatggaagcctttagggagaatt
tttacacaagatgtgtcgagtgtcaaatattcgactttgaagtgggcaccttcagttttc
agtgagaagcaatttcttcttatgggacatgtaggagggattgattttcttataatcaaa
atttctgaaagcgatggagataaaatcatataccacaagatatgcacaatccctttccct
actcgtactcatgaaagtggtcctgaccacatttttgcaacatctttaagccctacttgc
tgccagaatttcatttctaatagttttatgctttttggcatatggatgaaagactttcag
gctttatcatggaaagttgttttgcactcagatgatttacatggaagcagctgtcaatgt
ggctttgatgctggaagtgttgtgacatctgaggcttggagatatgaaagtacttttgat
ggtagaaggtatcatgttatagctcagccatgctcatcaaagattccagatcctcacaac
catgatcaggttacagctgttgctgtggtctgcccagataatttaatcccatctatccaa
caaaagtgggcttcttctagtgatttgtgcagcaacacttccttatataacatggcaaca
ggctgctctgatggcagcttgaaactgtggagaattggccatgtagtttcgtccattcca
ccttctgagctggcatccttatcctgggagcttgtgggcatgttcatggcacatcaggga
ccagttagtggcatttctttgtccagttgtggcagtaagattgcaactattagcatgggg
gctccaaacagtgtcagcactcttcatatatgggaatctatatgccttacaggtgcaggg
agtttcttgctagaagatactgtattgttaaatgaggctgttattgcttttgattggcta
gctgtagggaacggtcagctattgcttggggtttgcatgaggaatgagttgtgtgtatat
gcccagaaaaggcttgttggtcagattggggtaaaatcagagaaattatcagagatgcat
atttggttctgtattgcattttgtcatacttcacctgcagctcagggtttcttgtggggc
ccaaggtcaactcttattctagttcatgacatgtacttctcactttttagtcagtggtca
gcctgtacagatacgaaacaccaacctaagttctaccctgaatgcaccacaaatcatcct
tctcattacgtaggagatgtaaatgaagatctgctttgtgctatttatactgacagggat
ttatgcaatatgaaagaatcatcagtagatgtgaaatgtgagttacggccacctgttaac
actaacttcaaaaaatattccgggttgtgcaatttttgtttaacattatctcgacagcaa
tatgaatatggtaccaaaagtggtctacacagcatgcttgaaataggagagaaattgcgg
ggagctttgcccatatatcaccctgaggcactgtttctgtatttacattcagggaattgg
aaacgtgcatatgttgcagtgcagcatcttgtggaatatcttaattctgatgaaacctca
gctacctgcagcaaggaccatagttgtggaaaatctccccttgtcattccacagatccag
ttatcccagtattttggggaactttcctctaccacggcttgtgataaaggattgcactgg
ggtggaatatctagtacagtgtctcagagaagcttattccaacttgtggatggtaattca
gtagctaatgctcaatcgaatgtgttcgttgccacttctggaaaatttgaggtcactggc
ttcctgaggtctctagagaaatcccatgtcacaacagctatgacgaacacagagagaacc
caaattcttgcaatgatagatcttctgggtgaaattagcgattcactttatgcttctgca
tatgaaagttttgatgaacctggtcgaaggttttgggttgcggtacgatatcaacaacta
tatattctccggaaatttggaaggctggctgctgcagaagagttgatcgttgattctggg
tcaattgtgtgggccttccaatctgattgccaagacaatctgtttagttctttcctatct
aatgaaccatcttggatagaaatgagaaatttaggtgtgggattttggtttaccaatgtg
gcccagttacggacaaggatggagaagctggcaagagtacaatatttaaagaagaaggat
ccaaaggactgtgcacttctgtatcttgcactaaacagacttcaagtgttgactggactt
tttaaaatcagcaaagatgaaaaggacaggcccttggttggatttctttcacgcaatttc
caggaggaaaaaaataaggcagctgctttgaagaatgcgtatgttttaatgggaaaacat
cagctagagcttgctattgccttttttcttcttggaggtgatccttcttctgcagtcaca
gtctgcgctaaaaaccatggagatgaacagctggctcttgtaatttgccgactagttgag
ggatacggtggtccgttggaacgccatcttatatcaaattttctgcttccaactgcaatt
gagaaagaggattactggcttgctagcctgcttgagtgggtattggggaattattctcat
tcttttcagcatttgcttggcttcgagatggattctacagtcgataagttggctatccct
agcaatcgtgctgctctttcagacccaagtattggccagtactgtgtactgctatcggcg
aaaaataacatgaagaattctgttggggaatgcacagctgcaatgctggcaaggtgggca
acatggatgacggcaagtgccttaaaccgatgtggactcccgcttgaagctctggaatgc
ctttcatctgcttcaagcactcttgacagtaaagatcaggacagcttatcagatagtgga
aagcttagcactcttaatgagattctgaagccatccatgcatgaggcttcaagctggctg
tcaggagatgttacttggcatctggagtcccgtgctaaattgaatttggcaatgcagttc
gtttcaaaatcaataatggagcatccaagctggctatctggtgcacctgcctgcagttat
gatgctcatcaatatgagctgttactggaaaaatttgaacagatgctaaacatgggactt
gccattttggagcagaagtattcattggaatctgttgatttgatgaatatgataataaaa
tttgcatgcaacaatgggttattatttcttggatacagcatgttacatggctacacttct
cgagaacacccacatgatgaacagcatggctatacttctcaattacacctacacgatgaa
cagcatgcttctgacagttccatgctatgtcctcctctgcccaagctatttctgaaggct
agcaaagaggtatccggtttactcgtccggtatattgttgcctgcagtattactcgttcc
gcactgagaccaacattgcctgtgagaaatgtatttggtgaggttagatttggtcggttt
catccttgggatttttatttacaggatgttatgtgctcaatggggagtttaagacctctt
ttaaagctttatggttctggcttcctcacaaaagatctcactgtgaaaagctttactgtt
cttgatattcttgaatattgtgtgtgctttgcttcagcatggtctcaggggaattggaaa
acattatttcttatgatacagcccatcttgattgcatccagaggcggacattctccttct
gaaattaaactggcagacctgaagagatctttacttcaagctgcagagtcgatggtccat
gttacatctagtgattctgaaggaaacattccagcttctaactcccaacagcagcaacac
acacaaagtgaatcagtaatgctttcaataccggaagatgaaaaatggcaactcatcggg
gtttgtttgtggcgacacctatccaacctctgcaacagtcatttaaacacattgatggct
gatcttggaaatagtttttcttctagtgttcctctgtgtgaaggttcttctttgcaatct
agttctgcaaattatcaatctgatattaccagcatgctggaactgatcaagctgttccct
gcactcttagctaagttgataaaggacacagttgggtacatttcctcctctcttgctaaa
caacttgcatcattcctgggacagaaagtagagaagggtttgcctgcacctactcttgtt
ttgttagaggcatctagtcagtcagaacagaggccaccccacgattgcataaaacagggt
attgatagcttgcagattaacaatgaaaatggggcatacttctttgaaatactatgggag
atttgtgttgatcccaaggcaatccatgaaagttttatccatgaaaaattgcttttccct
tctgttggccagaagccctctaagggctggttggatatacataaagccatcactgatgag
tatgaaaatggtgacaccatacatactgatcaagttaggattagcagttctgctatttgc
gaagctggatttcatgctaggactcgatcttcggacagtagtcagggcaccggacgaaaa
gattccagtctcctcacggatgtgacttctttccggaatccgaaggaaatatataagaaa
aatggagagcttctagaggcaatgtgtgtaaattccatcaatcaacaacaagctgcactt
gccagcaaccggaaggggctaattttctttaatttgaaagttgaacctttccgagtgccg
gctgagtacatttggtcagagtctgattggccagagaatgggtgggcgggatctgaatcc
acaccaattgctacatttatttctccaggcattggtcttggcagcaagaaaggagcgcac
cttgggttgggtggaccaacagttggacgaggttctttggcaagacccgggaaggacttg
acgggtggtggagcatttggaattccaggttacgctggtgttggggcttctggctttggt
tggggtgaacaggaagattttgatgattttgttgatccaccagcaacagttgaaaacatt
aaaacaagagccttatccagtcatccttctaggccttttttcttggttggatccagcaat
acgcatgtttacctttgggagtttggtaagggcagagctacagcaacctatggtgtcctg
cctgctgcaaatgtacctccaccatatgcactcgcgtcaatatcggcattgcagtttgat
cgctgtggtcacagatttgctaccgctgcattagatggtactctttgcacatggcaactt
gaggttggaggcaggagcaacgtccaccctacagaatcatctctttgctttaacagctat
gcatcggatgttggatatgtggctgccagtggttcaattcttgccacggctggctatagc
ccaaatggcgtaaatttagtcatatgggatacattggctcctccagcaacctcacaagct
tctgttatatgtcatgaaggtggcgcacggtccctttcagtgtttgacaatgatatagga
agtggttcaatttcacctctgattgttactgggggaaaagggggcgatatcggactgcat
gactttcgctacattgcaactgggaggactaagcggcaccggcatctcaatgaacaaaac
atgaggtcctcttcagcccataacatgcagtctgggacttccaacaaatttggggaacaa
aaccggaatgggatgctttggcatataccaaaagctcaccaaggaagcattaccaaaata
tcaaccattcccaatacgagcctgttcttgacgggtagtaaagatggagatgttaaactt
tgggatgtaagaggttctgaggttgacctagtattccattggcaaaatatgcacgacaga
cacacttttctgcaaccgagttcacggggctttggtggagttgttcggcaggttgctgtc
acagacattgtagtcctttctcatggcttccttacatgtggtggtgatggttatgtgagg
atggtccagatcaaagatgcttag
DBGET
integrated database retrieval system
