Magnolia sinica: 131245304
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Entry
131245304 CDS
T09699
Name
(RefSeq) probable E3 ubiquitin-protein ligase ZFP1 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msin04121
]
131245304
Enzymes [BR:
msin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131245304
Ubiquitin system [BR:
msin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131245304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-RING_11
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf_RING_Vps8
zf-RING_16
zf-RING_Vps41
zinc_ribbon_16
zf-C3H2C3
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
131245304
NCBI-ProteinID:
XP_058100637
LinkDB
All DBs
Position
5:7340462..7359481
Genome browser
AA seq
595 aa
AA seq
DB search
MAQRNILCTSQMHDLEIEQGQSHLQPEPCILLGNMVNFPNPNIHPVLSAPGNATNLDHRH
LPMDHQDSSMFYGNQYNGLQHRHPVINIDLNSVAPSNFTYNPYMVPSSTSRIGPMPLNHG
SSDHIPSSSNHGLAGVSLDEYGRNTQFMDNLRGSCKRKTAEGVPGNFPVSGSASSSSSSS
GVPLNSGPQQWEEPFETGVGVLEPTGFTTSDYRGSGVLSINEGSQRSVRSRSSAINLQMD
SSLAHQNQLLQGNYMGRSFQAAGNAWVEQFGSNGGDGSSSGWSYAPSMAYLHGSFLISSG
KPLYIVNEKTFVSLPQQPVLQKKCPPSFLTGRSINGGPLEIGSMSGQGYQDTISGRNSGI
LLHPSSMHHPHPPPLPVQGMQGSHSYGYHPQVPTPSYRHPTTTNLHHGTLNPSRDVLESG
SRYPRPFSSSGDRMFRPHRRGPQGAPDGINGRMRYLSEDVAILEFSGFYGVGNLIDQHRD
MRLDIDDMSYEELLALEERIGDVNTGLSEESIRKCLKTKIHVSCIASSPPDQSASMMQDN
GTCIICQVEYEENETIGILDCGHNYHADCIKQWLLLKNICPICKVSALSSDGKEG
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcacagagaaacatactgtgcacgagtcaaatgcatgatttggaaatagagcagggg
cagagtcaccttcagcctgagccttgcattcttttaggcaacatggttaatttcccgaac
cccaacatccacccagtgttgtctgctcctgggaacgctactaatcttgatcaccgccat
ctgccgatggaccatcaagacagcagtatgttctatggaaaccagtataatggtcttcag
catcgtcatcctgtcataaacattgatttaaacagcgttgctccctccaacttcacctac
aacccgtacatggtaccttcatccaccagcagaattggccctatgcctctgaatcatggt
tcttctgatcacataccatcttcaagcaatcatggacttgctggagttagtttagatgag
tatggaaggaacacccaattcatggataaccttagagggtcatgcaaaaggaagaccgct
gaaggggttccagggaacttccctgtcagtggctcagcaagttcaagttcatcttcttca
ggggtcccactgaattcaggacctcagcagtgggaggaaccgtttgaaaccggtgttggc
gtgttggagcccacaggttttaccacatctgactacagaggaagtggagttctctcaatt
aatgaaggatctcaaagaagcgtgaggagtagatcaagtgccatcaaccttcagatggac
tcttctttggcacatcagaaccaattacttcaagggaattatatgggcagatcctttcag
gcagctggcaatgcatgggtggaacaatttgggagtaatggtggcgatgggagcagttcc
ggatggagttatgcaccttcaatggcttatttgcacggtagtttcttgatttcttcagga
aagccactctacattgtaaatgaaaaaacatttgtttccttaccacaacaaccagtttta
caaaagaaatgcccgccaagtttcttaactgggagaagcatcaatggaggtcccttagag
atcgggagtatgagtggacagggatatcaggacaccatatccggcaggaattctgggatt
ctcttgcatccttcttccatgcaccatccccatcctcctcctctgcccgtgcaaggcatg
cagggaagtcatagttatggctatcatccacaagttcctacaccttcctacaggcacccg
acaaccaccaacttgcatcatggcactctgaatccttctcgggatgttttagagtcaggg
tccaggtatccaaggcctttttcgtccagtggtgaccggatgtttaggcctcaccgaaga
ggaccacagggagctccagatggcatcaatggacgcatgagatatctatcagaggatgta
gcaatactggagttctcaggcttctatggtgttgggaatctcattgaccaacacagagat
atgcggctggatatagatgacatgtcttatgaggaactattggccttggaggaacggatt
ggagacgtaaacactggtttatccgaggaatccatccggaagtgtctaaagacgaagata
catgtttcttgcatagcttcttcccctccagaccagtcggcaagcatgatgcaagacaac
ggcacctgcattatatgccaggtcgagtatgaggagaatgagacaattggaatccttgat
tgtggtcacaattaccatgctgactgcataaagcaatggctattgttgaagaacatctgc
cccatctgtaaagtgtcagctttgtcctcggatggtaaagaaggatga
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