Magnolia sinica: 131245369
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Entry
131245369 CDS
T09699
Name
(RefSeq) clathrin heavy chain 2-like isoform X1
KO
K04646
clathrin heavy chain
Organism
msin
Magnolia sinica
Pathway
msin04142
Lysosome
msin04144
Endocytosis
msin05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131245369
04142 Lysosome
131245369
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
131245369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131245369
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msin04147
]
131245369
Membrane trafficking [BR:
msin04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
131245369
Exosome [BR:
msin04147
]
Exosomal proteins
Proteins found in most exosomes
131245369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
131245369
NCBI-ProteinID:
XP_058100763
LinkDB
All DBs
Position
5:8959751..8994964
Genome browser
AA seq
1699 aa
AA seq
DB search
MAAASAPITMKEALTLTSLGINPQFVTFTHVTMESDKYICVRETSPQNSIVIVDMNMPMQ
PLRRPITADSALMNPNSRILALKAQLAQTTQDHLQIFNIEMKAKVKSYQMPEQVVFWKWI
TPKLLGLVTQTSVYHWSIEGDTEPVKMFERTANLLNNQIINYRCDPSEKWLVLIGIAPGA
PERPQLVKGNMQLFSVDQQRSQALEAHAAAFATFKVAGNENPSTLICFASKTMNAGQIIS
KLHVIELGAQPGKPGFTKKQADLFFPPDFADDFPVSMQISHKYSLIYAITKLGLLFVYDL
ETAAAVYRNRISPDPIFLTSEASSVGGFYAINRRGQVLLATVNEAAIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFSQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLFMRALQHYTELPDIKRVIVNTHAI
EPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQAAKEYSDQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDPEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYSNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDSDLWENVLKPENEYRRQLIDQVVSTALPESKSPEQVSATVKAFMTADLPHELIE
LLEKIVLQNSAFSGNSNLQNLLILTAIRADKSRVMDYVNRLDNFDGPAVGEIAVEGELYE
EAFAIFKKFNLNVQAVNVLLDNIQSIERAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDVTQFLDVIRAAEDANVYHDLVRYLIMVRQKTKEPKVDSELIYAYAKIDRLAEI
EDFILTPNVANLQTVGDRLYDEALYEAAKIIFTFISNWAKLASTLVKLRQFQGAVDAARK
ANSSKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSDYYQNRGCFDELISLMESG
LGLERAHMGIFTELGILYARYRPEKLMEHIRLFSTRLNIPKLIRVCDEQQHWLELTYLYI
QYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVL
ATKVDHTRVVDIMRKAGNLHLVKPYMVAVQSNNVAAVNEALNEIYIEEEDYDRLRESVDM
HDNFDQIGLAQKVEKHELLEMRRIAAYIYKKAGRWRQSVALSKKDNLYRDAMETCSQSGD
RELSEELLVYFVDQGKKECFASCLFTCYDLIRPDIALELAWMNNMIDFAFPYLMQFIREY
TGKVDELVKYKLEALQEVKSKENEEKELVAQQNMYAQLLPLALPAPPMPGMGGGFQPPPP
MGMGMPPMPAYGMPPMGGY
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcgagtgctccgatcacgatgaaggaagctctaacgctgacaagcttgggg
atcaacccccagtttgttacctttactcatgtgaccatggaatctgacaagtacatatgc
gtgcgagaaacttctccgcagaatagcatcgtcattgtggatatgaatatgcctatgcag
ccattgaggaggcccatcactgcagattctgctttgatgaaccccaatagcagaatcttg
gcattaaaagctcaactcgcgcaaactactcaggaccatctgcaaatattcaatattgag
atgaaggccaaagtgaaatcttatcagatgcctgagcaggttgtgttttggaagtggatc
actccaaaattgttgggattagttacacaaacctcggtatatcattggtccatagaaggt
gacactgagcccgtgaaaatgtttgagcgaacggcaaatctgttgaacaatcaaatcatc
aattaccgctgtgatccttctgagaaatggcttgttttgattggcattgctcctggtgca
cctgagcggccacaacttgttaaggggaacatgcaactgttttccgtagaccagcaacgt
agtcaagctttagaagcacatgctgctgcctttgcaacgtttaaagttgctggaaatgag
aatccttctactcttatttgctttgcatcaaagaccatgaatgccggtcaaattatttcg
aagttgcatgtcatcgagctcggtgctcagccagggaagccaggctttacaaagaagcaa
gcagatctcttcttcccaccagattttgcggatgactttccggtgtcaatgcagatatca
cacaagtacagtctgatatatgcaattacaaagcttggacttctatttgtttatgatctt
gagactgctgctgcagtttaccgtaaccgaattagtccagatcccatatttttgacctca
gaagcatcatcagtggggggtttctatgccatcaataggcgggggcaagttttgcttgct
actgtcaatgaagcagcaattgttccttttgtcagtggtcagctaaacaatttggaactt
gctgtaaaccttgcaaagagaggaaatcttccaggagctgaaaatttggttgttcagcga
ttccaagaattattttctcaaacgaagtataaggaggctgccgaacttgccgctgaatct
ccacagggaattcttcgcacacctgatactgtagcaaaatttcagagtgttcctgtgcaa
gctggacaaacgccgccactactgcagtactttgggacattgcttacaaaggggaagctc
aatgcatttgaatctcttgagttatcccgtttggttgtgaaccagaataaaaagaatctt
ctggagaattggcttgctgaggataaacttgaatgcagtgaggagctgggtgatcttgtc
aagacggttgacaatgatcttgcactaaaaatatacataaaagcgagggccaccccaaaa
gttgtcgccgcttttgctgagcgaagggaatttgataaaatacttatttactccaaacag
gttgggtatacacctgattatctattccttctgcaaacgattttgagatctgatcctcag
ggtgctgttaattttgctcttatgatgtctcaaatggagggaggttgtcctgtggattac
aacacgattacagatcttttccttcagagaaacctgattcgggaagcaactgcattttta
ttagacgttttgaagccaaacttgccagaacacgggttccttcagacgaaggttttggag
atcaatctagtcacctttccaaatgttgctgatgccatcttagcaaatgggatgttcagc
cactatgatcgtcctaggattgctcaactttgtgagaaggcgggcctttttatgcgtgct
cttcagcactacactgagctaccggatataaagcgtgtaattgtgaacactcatgctatt
gagccgcagtcacttgtagaattctttggaaccctttcgagagagtgggcattggaatgc
atgaaagatcttctattggttaacctgaggggaaatcttcagataattgttcaggctgca
aaagaatattcagaccagttgggtgtggatgcatgcattaaactctttgagcagtttaag
tcttatgaaggtctctactttttcttgggttcatatttgagctccagcgaggatcctgat
atacatttcaaatacatagaggcagctgctaaaactggccaaataaaagaggtcgagcgt
gtaacaagagagtcaaatttctatgaccctgagaagacgaagaattttttgatggaagcc
aagcttccggatgcacgccccctgatcaatgtttgtgatcgttttggatttgtaccagat
ctgacccactatttgtactcaaacaatatgttgcggtatattgaagggtatgtccagaag
gttaatccaggtaatgctcctttagtggtggggcagcttctagatgatgaatgtcctgaa
gatttcattaaaggccttattctttctgtccgctctcttcttcctgttgagcccttggtt
gaggagtgtgagaagaggaatcgtctgcgattgctcacgcaattcttagaacatctagtg
agtgaaggaagccaagatgttcatgtgcacaatgctcttggcaaaatcattattgacagc
aacaacaaccctgaacattttcttaccaccaatccttactatgattcacgtgttgttggt
aaatactgtgagaagagggatcccactctcgcagtcgttgcttaccggagaggccaatgt
gatgacgaacttatcaatgtcaccaacaaaaattctctattcaaacttcaggctagatat
gttgtggagagaatggattcggatttgtgggaaaacgttctaaagcctgagaatgaatat
cgacggcagcttattgatcaagttgtgtcaacagctttacctgaaagcaagagcccagag
caagtttctgcgactgtaaaagcttttatgactgccgatcttccacatgagctaattgag
cttcttgagaagattgtactccaaaattctgcatttagtggcaactctaacctgcagaac
ttgctgatccttactgctattagagcggacaagtcaagggtcatggactatgtcaacaga
ctcgacaattttgatgggcctgcagttggtgagattgctgttgagggtgaactgtatgaa
gaggcatttgccatattcaaaaagttcaacttgaatgtgcaggcagtcaatgtgctgttg
gataatatccaaagcattgagcgtgccgttgagtttgcgtttcgagttgaagaggatgct
gtatggagccaggtggccaaagcccaactcagggagggacttgttagtgatgcaatagag
tcatttatccgtgcagatgatgtcactcagttcctagatgtaatcagggctgccgaggat
gcaaatgtataccatgacttagtcaggtacctgattatggttaggcaaaagacgaaagag
cccaaggttgacagtgagcttatctatgcatatgccaagattgataggcttgctgaaatt
gaagattttattctcacacctaatgtggcaaatctccaaactgttggtgatcgcctatat
gatgaagccctttatgaagctgcaaagatcatatttacatttatttcaaactgggcaaaa
cttgctagtactcttgttaaattgagacagttccaaggtgcagttgatgcggctcgcaag
gccaacagctcaaaaacatggaaggaagtctgctttgcttgtgttgatgcagaggagttc
cgtttggctcagatttgtggtctgaacatcattgtacaggtggatgacctggaagaagta
agtgattattatcaaaacagaggatgctttgatgaactgatctccctcatggagagtggt
ctgggactcgaacgggcacacatgggtatctttacagagttggggatcttgtatgcaaga
tatcgtccggagaagcttatggaacacatcaggttattttcaacacgcctcaacattcca
aagctcatccgtgtctgcgatgaacagcagcattggttggagctcacttacctatacatt
caatatgatgagttcgataatgctgctacaacgattatgaaccactcccctgaagcatgg
gatcatatgcagttcaaggatgttgccgttaaggtggctaatgtggaattatactacaag
gcagtgcatttctacctgcaagagcacccagatctcatcaacgatctccttaatgttctc
gcgactaaagtggaccacactcgtgtggttgatataatgcgcaaggcagggaacttgcat
cttgtgaagccatacatggttgcagttcagagcaacaatgtagcagctgtgaatgaggct
ctgaatgaaatctacattgaagaggaagattatgacagattgcgggaatcagttgacatg
catgataactttgaccaaataggcctggcacagaaggttgagaaacatgaactactcgag
atgcgaaggattgcggcttacatatacaagaaggcaggtagatggcggcaatcagttgca
ttatccaagaaggacaacctctacagagatgccatggagacttgctcacaatcaggagat
cgcgaactgtctgaggaattactggtttatttcgttgatcagggaaagaaagagtgcttt
gcatcttgcttattcacgtgttatgatttgatccggcccgatattgctcttgagctggct
tggatgaacaacatgatcgactttgctttcccgtatttgatgcagttcatccgtgagtat
acgggtaaagtagatgagctagtgaagtataaacttgaagcattacaagaagtgaagagc
aaagagaacgaggaaaaggaattagtggctcaacagaacatgtatgcgcagctgcttccg
cttgctttgccggcaccaccaatgccgggcatgggtgggggattccagcccccaccgcca
atgggtatggggatgcctccgatgccagcttacggcatgccgcccatgggaggatattaa
DBGET
integrated database retrieval system
