Magnolia sinica: 131245730
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Entry
131245730 CDS
T09699
Name
(RefSeq) CLIP-associated protein-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msin03036
]
131245730
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
msin04812
]
131245730
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
131245730
Cytoskeleton proteins [BR:
msin04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
131245730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EZ
HEAT
Vac14_Fab1_bd
TOR1L1_N
HEAT_2
PDS5
UTP20
Cnd1
Adaptin_N
INTS1_R4
HEAT_Maestro
MMS19_N
Tti2
RRP12_HEAT
HEAT_DAAF5
TPR_TTI1_N
Tra1_ring
MMS19_C
SEN1_N
Dopey_N
Motif
Other DBs
NCBI-GeneID:
131245730
NCBI-ProteinID:
XP_058101369
LinkDB
All DBs
Position
5:22158035..22246932
Genome browser
AA seq
1459 aa
AA seq
DB search
MEEALEMARAKDTKERMAGVERLHQLLEASRKSLSPADVTSLVDCCMDLLKDNSNFRVSQ
GALQALASAAVLSGEHFKLHFNALVPSVVERLGDGKQPVRDAARRLLLTLMEVSSPTIIV
ERAGSYAWTHKSWRVREEFARTVTSAIGLFASTELPLQRVLLPPVLQLLNDSHQGVREAA
TLCIEEMYTQVGPQFRDELQRHHLPTSMVKEINARLENIEPKIRSSDGRTGHFVPMEMKS
TSLPAHHQKRNSPKAKNTARESSLLGDIGESDVTEKPVDPVKVYSEKELIREIEKVAATL
VPEKDWSIRITAMQRVEGLVFGGATNYPSFPTLLKQLVPPLSTQLSDRRSSIVKQACHLL
SLLSKELLGDFEACAEMFIPVLFKLVVITVLVIAESSDNCIKTMLRNCKVSRILPRIADC
AKNDRNAVLRARCCEYALLILEYWADAPEIQRSADLYEDLIKCCVADAMSEVRSTARTCY
RMFTKTWPERSRRLFSSFDPVIQRLINDEDGGVHRRYASPSLRERGVQLPRTQSQTMASD
LPGYGTSAIVAMDRSAGFASGTSLSSGSMLLSQTKPIGKGTERSLESVLHASKQKVTAIE
SMLRGLDISEKFNPSVTRSTSLDLGVDPPSSRDPPFPLAVPATDHLKVQNSVLGDSTVAK
IARVSIRSGGPVFSDLITAQVQASKDPDKVSYLSNLTTESSSALSLSYTGKRSSVRLQEG
CSVEENTDMRPIRRFPNMHIDKQYLDTPYKDVSFREAHGSYIPNFQRPLSRKNTTGRTSA
SKRHSFDDSQLSIGDISSYTDGPASLSEALTEGLSASSDWCARVSAFNYLRTLLQQGPKG
IQEVTQSFEKVMKLFFQHLDDPHHKVAQAALTTLAEIIPTCRKPFESYLERILPHVFSRL
IDPKELVRQACSTTLEIVSKTYGIDSLLPAFLRSLDEQRSPKAKLAVIEFAINSFNKHAL
NSEGPGNSGLLKLWFAKLAPLAHEKNIKLKEAAITCIISVYSHYDSASVLNFILSLSVEE
QNSLRRALKQYTPRIEVDLMNYLQNKKERQQRSKFFYDQSDLVGSSSEEGYVGTSKKNHL
LGRYSAGSIDSDGGRKMSSMQESMQISGSIGQAISDESMEHFYQNFEGGSNNEFLFSSRN
KDLNLNVNTTADNGGSLTNRNEDVGRSIDFESSSVTPHLDLDGLMNSDSQGANRLRLGSE
GFPNVELNQDKPAITNKSIPDSSPSIPQLLHRICNGNDESSIISKCGALQQLVEASMAND
HSVWTKYFNQILTAVLEVLDDADSSVRELALSLILEMLNNQKDTMEDSVEIVIEKLLNAT
KDAVAKVSNEADHCLTVILSQYDPHRCLTVVVPLLVSEDEKTLVTSINCLTKLVGRLSQE
ELMAQLPSFLPALFDAFGNQSADVRKTVVFCLVDIYIMLGKAFLPHLEGLNSTQLRLVTI
YANRISQARSGAAINANHG
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcgctggagatggcacgtgccaaagacacgaaggagcggatggccggggtg
gagcgccttcaccagcttctagaagcttccaggaagagcctctcccctgccgacgttacc
tccctggtcgactgctgcatggatcttctcaaggacaacagcaacttcagggtctctcag
ggcgctctccaagccctagcttctgctgccgtgctctcgggcgaacatttcaagctccac
ttcaatgccctcgtcccatccgtcgtcgagcggctcggagatggcaagcagcccgtccgt
gacgctgcccgtcgcctcctccttacgctcatggaggtttcttcgccaacgataattgtt
gaaagagctggaagttacgcatggacacacaagagttggagggtgcgtgaggagtttgca
cgtactgtcacgtctgcaattggtctttttgcatctactgagcttcctcttcagcgggtt
ctacttcctcctgttttgcagttgttaaacgactctcatcaaggcgttagggaagcagct
actttgtgcattgaggaaatgtatacacaggttggaccacaattccgtgatgaattgcaa
cgccatcatcttcctacctctatggtgaaagaaataaatgcaaggctggagaatattgaa
ccaaagatccgctcttcagatggacgaaccggtcattttgtcccaatggaaatgaagtcc
actagtctccctgcacatcaccagaaaagaaacagcccaaaggccaagaatactgcacgc
gagtcatctctcttgggagatataggagaaagtgatgttacagaaaaacccgttgaccct
gttaaagtgtactctgagaaggaattgatcagggaaattgagaaggttgcagctactctt
gtcccagaaaaggattggtcaataaggataactgctatgcagagagttgaaggccttgtt
tttggtggtgctactaattatccatcttttcccacactcctgaagcaacttgttcccccc
ttgagcactcagctttctgatcgacggtctagcatagtaaaacaggcttgccatctgcta
agtttactatcaaaggaacttttgggagattttgaagcatgcgctgagatgttcattccg
gtgcttttcaagctggttgtgataacagtgcttgtaattgcagagtcttctgacaactgc
ataaagacgatgttacggaactgcaaagtttcccgaattcttccccgaatagctgattgt
gcaaagaatgaccgaaatgcagtgctacgtgctaggtgttgtgaatatgcacttctgatc
ctagagtactgggctgatgcacctgaaattcagcgatcagccgatctttatgaagatctg
ataaaatgttgtgttgcagatgcaatgagcgaggttcgatcaactgcaagaacttgctac
cggatgttcacaaaaacttggccagaacgttcccggcgccttttttcatcctttgatcct
gtcatacaaaggctaataaatgatgaagatgggggagtgcacagaagatatgcttctcct
tcactccgtgagagaggtgtgcagttgcctcgtactcaatctcaaacaatggcttcagat
ttacctggatatggtacttctgctatagtagcaatggataggagtgcaggttttgcttcg
ggaacatcactttcttctggaagtatgctactttcacaaacaaagcctattggaaaaggt
acagaaagaagccttgaaagtgtgctgcatgcaagcaaacagaaggttacagcaattgag
agcatgctgagaggtctagatatatctgagaagttcaatccttcagttacacgctccact
agtttggatctaggagtggaccctccatcatcccgtgatccaccatttcctctagctgtt
cctgctacagaccatctcaaagtacagaattcggtgttgggtgattctactgtagccaaa
attgctagagttagtatccgtagtggtggcccggttttctctgatctcatcactgcacaa
gttcaagcttccaaagatcctgataaagtatcttatctcagtaatttgacaactgagtct
tcgtcagcactatcattgtcatacacgggtaagaggtcttctgtaaggctacaagaagga
tgttctgttgaagagaacactgatatgaggccaatcaggaggtttccaaacatgcacatt
gataagcagtatctggatacaccgtataaagatgtgagttttagggaagcgcatggcagt
tatattcctaatttccagagaccactttcgagaaagaacacaactgggaggacttctgca
agcaaaagacacagtttcgatgatagtcaattatcaattggtgatatatctagctatacg
gatggtccagcttctctcagcgaggctctaactgaggggctgagtgccagttctgattgg
tgtgctagggtttctgcttttaactatctcagaactttgctgcagcaaggtccaaaaggt
attcaagaagttacacagagttttgaaaaggtaatgaagctgttttttcagcacttggac
gatcctcatcataaagttgcacaagcagctcttacaacacttgcagagattattccaacg
tgcagaaagccttttgaaagttatctagaaaggatcttgccccacgttttttcacggttg
atagatccaaaggaattggttaggcaagcttgttcaacaaccctagaaattgtcagtaag
acttacggcatcgattctcttcttcctgctttcttgcgttcattggatgagcaacggtca
ccgaaggcaaaattggctgtcattgagtttgccattaattccttcaacaagcatgctctg
aattccgaaggtcctggtaatagtggcttgctgaagttatggtttgctaagttggcacct
ttggcccatgaaaaaaatataaaactgaaggaagcagctattacctgcatcatatcagtt
tattcccactacgattcagcctcagtcctgaattttattctcagtctatcagttgaagag
caaaattcattaaggcgcgcacttaagcagtatacccctcgtatagaggtggacctcatg
aactatttgcagaacaagaaggaacggcaacaacgctctaaattcttttacgaccaatca
gatctggttggcagttcttctgaggaaggatatgttggaacatcaaagaaaaatcacctc
ctcggaaggtattctgctggttccattgatagtgatggcggcaggaagatgagctccatg
caagaatcaatgcagatcagtggctctattggtcaggctatttctgacgaatcaatggaa
cacttctatcaaaacttcgagggtggctctaacaatgagtttctttttagttccagaaac
aaggatcttaatctcaatgttaatactacagcagataacgggggctctttgactaaccgt
aatgaagatgtgggtcgcagcatagattttgaaagttcctcggtgactccacatctggat
ttggatggactgatgaactctgatagtcaaggagccaatagattgaggcttggcagcgaa
ggctttcctaatgtggagcttaatcaggataagccagctattacaaacaagtccattcca
gattcttctcctagcattcctcaacttcttcacaggatttgcaatggcaacgatgagagt
tcaattataagtaaatgcggcgcccttcaacaattagttgaagcttccatggctaatgat
cactccgtgtggaccaagtacttcaaccaaattctaactgccgtacttgaggtcttggat
gatgctgattcttctgtcagggaacttgctctttccttgatactcgaaatgcttaacaat
cagaaagacacgatggaggattctgttgaaattgttattgaaaaattgcttaatgctacc
aaggatgctgtggccaaggtttcaaatgaagctgaccactgtttgactgtcatattatct
cagtacgacccacatagatgccttacggttgttgtacctttattggttagtgaagatgaa
aaaacccttgttactagcatcaactgtttgacaaagcttgtggggcggctttcacaggag
gaattaatggctcagttgccttcatttctgcctgctctttttgatgccttcgggaaccag
agtgctgatgtccgcaagacagttgtattctgtttggtggatatctatatcatgctcggc
aaagcatttttgccacatctagagggacttaacagcacacagttgcggcttgtgaccatc
tatgccaaccggatatcacaggcaagatcaggtgctgcaataaatgctaaccatggctag
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integrated database retrieval system
