KEGG   Magnolia sinica: 131245806
Entry
131245806         CDS       T09699                                 
Name
(RefSeq) splicing factor U2af large subunit A
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
msin  Magnolia sinica
Pathway
msin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131245806
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msin03041]
    131245806
Spliceosome [BR:msin03041]
 Complex A
  U2 snRNP components
   U2 related factors
    131245806
 Complex B
    131245806
SSDB
Motif
Pfam: RRM_1 RBD_DEAH11 RRM_9
Other DBs
NCBI-GeneID: 131245806
NCBI-ProteinID: XP_058101496
LinkDB
Position
5:25227134..25266327
AA seq 923 aa
MSRTDRQKDKYGNSKELPCNASNEGTAARTRPFSFEEIMLRRKNKKLTEDAKESVGELGR
LSRKEHGESASDHSGSDGGQEPKKDSVLGVTRHVSRDSDKGISRKKEENKSTKEDGFMKD
KVGLDSEAKLKVKSSKDRSKSEKDKGDKNEKQSHYRGRNDDRTRPDFENESEKKQSKDMV
VKDKNRERNKTSHRESKRKQLGRNDEEKISEGDVIASKRHDSGKWQDTDYSERKGRRKES
SQSHYEETRQKRRRSRSWEHDKDRDRSISISPRGHKRLSNQGRDHGQSSFRSFKDRSGRQ
HSDADKNRMSSSGGHASGHYRRYGGHTSGLGGYSPRKRRTEAAIRTPSPTNRSPERKSAA
WDLAPDDVGAGSVITSFRSSRQAVSSSTHELSAAATAALTTEKSQNAASTVTVSTVKDIS
FDSIQLTQATRPMRRLYVENLPATASDKAVMECLNDFLLSSGVNHIQGTQPCISCMMNKE
KGQALVEFLTPEHASSALSFDGRSFAGSILKIRRPKDFVEAATGVTEKPVATVITSISDV
VKDTPQKIFIGGIPKALPSDMLMEIVTVFGPLKAYRFEANEEFGEPSAFLEYVDHSVTLK
ACAGLNGIKLGGNVLTVVQAVPDASEEGTTETPHFYGIPEHAKPLLEKPTQVLKLKNVFD
QEEFSMISEPELEETLEDIRLECARFGTVKSVNIVRFNKDNMIAPDALDISNDSNIQSVS
QDPETDNVRSTLMEHLNSDTKENGEAKPQNAVEEPQDLREVEEASKVGDDKPMHDDLENE
ECGGAGKVDSEVTAEEPLQLGTTEDRPACSDEVSDSQIGDSGSGTSSVPDDPKPEQADGE
LQDACVELEMDTTTVEKSYDGNGDSTEKVCNPDVFEKGCILVEYMRREAACAAAHCLHGR
LYGGRVVAAEYAPYDLYHARFPK
NT seq 2772 nt   +upstreamnt  +downstreamnt
atgagcagaactgataggcaaaaagacaagtatggcaatagtaaagagcttccttgtaat
gcctctaacgaaggtaccgctgctcggacaagacctttcagctttgaagagattatgtta
agaaggaaaaacaagaaactgacagaagatgccaaagagagtgtaggagaactggggagg
ttgtcgagaaaagagcatggcgaaagtgcctccgatcattctggatccgatgggggtcaa
gagcccaaaaaggattctgttttgggtgtgacgaggcatgtttcaagggattccgataag
ggaatttctcgaaagaaggaagaaaataagtccacaaaggaagatggtttcatgaaagat
aaagtcggtctggattcggaagctaaactgaaggtgaagtccagtaaggacaggagcaag
agcgaaaaagataaaggagacaagaatgaaaaacagagtcactaccggggcaggaatgat
gaccgaacaaggcctgattttgaaaatgagtctgaaaagaaacagtctaaagatatggtt
gtgaaggataagaacagggagagaaacaaaacttcccatagagagagtaaacgaaaacag
ttgggtagaaatgatgaggaaaaaatatcggagggagatgtgattgcttcaaaaagacat
gattctggcaaatggcaagatactgattattcagaaaggaaaggcaggaggaaagaatca
tctcaatcccattatgaagaaactagacaaaaaaggagaaggtcaaggagttgggaacac
gataaagacagggataggtctatttcgatctcaccaaggggacacaaacgtttgtctaat
cagggacgagatcatggtcaatcatcatttcgctccttcaaggacaggtcaggaaggcag
cattctgatgctgacaagaatagaatgtcaagtagtggtgggcatgcaagtggccattat
cggcggtatggtgggcatacaagtgggcttggtggctattccccaaggaagagaagaacg
gaggcagccattaggactccctccccaacaaatcgctcgcctgagaggaaaagcgctgct
tgggatctcgcaccagatgatgttggtgctggttctgtgataaccagttttcgatcatct
cgccaggccgtatcatcgagtacacatgagttgtctgctgctgccactgctgcattgacc
acagagaagtcccaaaatgcagcttccacagtaactgtatcaacagtcaaggatatctcc
tttgactctattcaactaacgcaagctactcgacctatgaggagactttatgtagaaaat
ttaccggcaacagcttctgataaagctgtaatggaatgtcttaatgatttcctgctatca
tcaggtgttaatcatatccaaggaacccagccatgcatcagctgtatgatgaacaaagag
aagggtcaagcccttgtggaatttcttaccccagaacatgcttcatcagctctttcattt
gatggtagatcctttgctggatctatcctcaaaatcaggcgccccaaagattttgttgaa
gctgcaacaggagtcacggagaaaccggtcgccacagttattacttcaatatctgatgtt
gtaaaggatacaccacaaaagatcttcattggtggtattccaaaagcactgccatctgat
atgcttatggagattgttactgtctttggacctttgaaagcatatcgctttgaggctaat
gaggagtttggtgaaccatctgcctttctggagtatgtagaccactcagtcactctcaag
gcatgcgctggattgaatggaataaagttaggagggaatgtcctcactgtagttcaagct
gttcctgatgcatctgaggagggaactactgaaaccccccatttctatggcattcctgag
catgcaaagccactgcttgaaaaacccacacaggtcctgaagcttaaaaatgtgttcgat
caagaggagttctcaatgatatctgaaccagaattggaagaaacgttagaagatatacgg
ttagagtgtgccaggtttggcactgtcaagtccgtgaatattgtcaggttcaacaaagat
aacatgattgctcctgatgcattggatatctccaacgatagcaatatacagagtgtttcg
caggatcctgagactgataatgtaaggtcaacattgatggagcacctgaacagtgatacc
aaagaaaatggtgaagcgaagcctcaaaacgctgttgaagaacctcaagatctcagggaa
gttgaggaagccagcaaagttggtgacgataaacccatgcacgacgatcttgaaaatgag
gaatgtggtggggctggtaaggtagacagtgaagtgactgctgaagaaccgctccagctt
ggcactactgaagatcgaccagcatgttccgacgaggtttctgattctcagattggagac
tctggcagtgggaccagttctgttcctgatgaccctaaacctgagcaagctgatggcgaa
cttcaggatgcttgtgttgaacttgaaatggatactactaccgtggagaaatcatatgat
ggaaatggggacagcaccgagaaggtttgcaaccctgatgtatttgaaaagggttgcatt
cttgttgagtacatgaggagagaagctgcttgcgcagcggcccattgcttgcatggacgg
ctctatggtggccgggtcgtggcagctgaatatgccccttatgacctatatcatgcacga
tttccaaaatga

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