Magnolia sinica: 131245857
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Entry
131245857 CDS
T09699
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
msin
Magnolia sinica
Pathway
msin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131245857
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msin01009
]
131245857
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131245857
03036 Chromosome and associated proteins [BR:
msin03036
]
131245857
Protein phosphatases and associated proteins [BR:
msin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
131245857
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
131245857
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
131245857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
131245857
NCBI-ProteinID:
XP_058101570
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Position
5:complement(28111361..28168915)
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AA seq
540 aa
AA seq
DB search
MDMELVGDIASLDPELLQLPEVSPLALKSNPYVADELFSQWLSLPETGRMVKSLLDDAKA
GTPLSNPGNSSSTHAAATNSLPSMFPAGGAPPLSPRSTSGSPRIMKRAMVGPSTLGSPLK
LVSEPVREVIPQFYFQNGRPATNELKEQCLSRIDHLFFGHMDGLQVQDFKSVTKEICKLP
SFFSSTLFRKIDVDCTGIVTRDAFVDYWVNRNMMTMDIATQIFAILKQPDRKYLTQEDFK
PVLRELLATHPGLEFLQSTPEFQERYAETVIYRIFYYINRSGNGHLTLRELKRGNLIAAM
QHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRI
FSQIPRKFTSKVEGKMGYEDFVYFMLSEEDKSSEPSLEYWFKCIDLDGNGVLTPNEMQFF
YEEQLHRMECMAQEPVLFEDILCQMVDMIGPERESHLTLRDFKSCKLSGNVFNILFNLNK
FVAFETRDPFLIRQEREDPTLTEWDRFAHREYIRLSMEEDGEDASNGSAEVWDESLEAPF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggatatggagctcgttggggacattgcgtccctcgacccggaattgctgcagcttccg
gaggtttctccgttggcgctcaaatcgaacccttatgttgcagacgagctgttctcgcag
tggctctcacttccagagacgggtcgaatggtaaaatccttgcttgacgatgcaaaggca
ggcacgcccttgagcaatcctgggaactctagcagtacacatgctgctgcaaccaattca
ttgccttctatgtttcctgctggcggtgcacctccactttcaccaagaagtacttcgggt
tctccacgtattatgaagcgtgcaatggttgggccttctactttaggttctccactaaaa
ttggtcagtgagccagtgcgagaagtcatacctcagttctattttcagaatggtcgccct
gctacaaatgaactgaaagagcaatgcttgtctagaattgatcatcttttctttggtcac
atggatggactccaagttcaagacttcaaatctgttacaaaagaaatctgcaaactgccc
tcgtttttctccagcaccctttttagaaagatcgatgttgactgtactggaatagtgacg
agggatgcgtttgttgattattgggtcaatagaaacatgatgacaatggatatagcaacc
caaatatttgcaatattaaagcaaccggatcgcaaataccttactcaggaagacttcaaa
cctgttcttcgagaacttttggcaactcatccggggttggagttcttgcagagcactcct
gaatttcaggaacgatatgcggaaactgtcatatacagaatattttactacataaataga
tcgggaaacggccatcttaccctcagggagctgaaacgtggaaatttaattgctgcaatg
caacatgcagacgaggaggaggatataaacaaagtgttgaggtacttctcctatgagcat
ttctatgtgatatactgcaaattttgggagctggatacggatcatgatttcttgattgat
aaagagaatcttattagatatggtaaccatgctctcacatacaggattgttgacagaatt
ttttcacagattccaagaaaatttactagcaaggttgaaggaaagatgggatatgaagat
tttgtttactttatgttgtcagaggaggataaatcatcagagcctagtcttgagtactgg
ttcaagtgcatagatttagatggaaacggcgtactcacacccaatgaaatgcagttcttt
tatgaggagcagttgcatcgcatggagtgcatggcccaggaacctgtgctctttgaggac
attctatgccagatggtggacatgattggaccagagagagagagccatttaactctacgt
gactttaaaagctgcaaactttcaggaaatgttttcaatatcctttttaatttgaataag
ttcgtggcctttgaaactcgtgatccatttcttattcgccaggagagggaagatcctact
ttgacagagtgggaccgatttgctcacagagaatatattagactttcgatggaagaagat
ggtgaagatgcttccaatggaagtgcagaagtttgggatgaatcgcttgaggctcccttc
tga
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