Magnolia sinica: 131245930
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Entry
131245930 CDS
T09699
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
msin
Magnolia sinica
Pathway
msin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131245930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131245930
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
131245930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
131245930
NCBI-ProteinID:
XP_058101701
LinkDB
All DBs
Position
5:33993759..34042636
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AA seq
258 aa
AA seq
DB search
MGGKGGTAPTTYAPTPPTLKKQQQQQQSIFKEVDWVRCDGRGFHQCRPAFLRTGAVNAAS
GSAYAEFGNTKVIVSVFGPRESKKAMMYSDVGRLNCNVSFTTFATPARSQGSDHKEFSSI
LHKALEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLFDLVSSVSV
SCLGKNLVIDPTLEEESYQDGSLMITCMPSRNEVTQLTLTGEWSTPKIHEAMELCLDACS
KLGKITRSCLKEAASASQ
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgggagggaagggtggaacagccccaacgacctatgcgccaactcctcccacgctaaag
aagcagcagcagcagcagcaatccatcttcaaagaagttgattgggttcgttgcgatgga
cgaggatttcatcagtgccggcctgcttttttgaggactggagcagtgaatgctgcatca
ggatctgcttatgccgagtttggaaataccaaggtcattgtctccgtatttggtcctaga
gaaagtaagaaagcaatgatgtacagtgatgtaggtcggttgaattgtaatgtgagcttc
acaacttttgccactccagctcgcagccaggggtctgaccacaaagagttttcatcaatt
cttcataaagctttggagggcgctatcatactggagtctttccccaagacaactgtagat
gtttttgctttggtgttggaatctggtggcagtgatcttccagtcgtcatatcatgtgcg
agtcttgcattggcagatgcagggattatgctgtttgacttagtttcttcagtttccgtg
tcttgtcttgggaagaacctcgtcattgatcctacattagaagaggaaagctaccaagat
gggagtcttatgatcacctgcatgccttctcggaatgaggtcacccagctaacccttact
ggagaatggtcgactccaaagattcatgaggcaatggagctttgcctagacgcttgctcg
aagctcgggaagatcacgaggtcctgtttaaaagaagctgcttctgcatcccagtag
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