Magnolia sinica: 131245952
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Entry
131245952 CDS
T09699
Name
(RefSeq) mRNA-decapping enzyme subunit 2-like isoform X1
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
msin
Magnolia sinica
Pathway
msin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131245952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131245952
Enzymes [BR:
msin01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
131245952
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131245952
mRNA degradation factors
5'-3' decay
Decapping complex
131245952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
DNA_methylase
Motif
Other DBs
NCBI-GeneID:
131245952
NCBI-ProteinID:
XP_058101756
LinkDB
All DBs
Position
5:39916450..39966517
Genome browser
AA seq
322 aa
AA seq
DB search
MAGIHRSSSTPMRNILPPQELLDDLCSRFVLNVPQEDLQSFERILFLVEQAHWFYEDNSM
EQNPLLKALSLREFTSLMFNSCAALRPYIAHIDDIYKDFTSYKVRVPVTGAIILDESYER
CLLVKGWKAGASWSFPRGKKNKDEEDHTCAIREVLEETGYDVSKLLKMDEYIEVTIGQQR
VRLYIIAGVKEDTVFAPLTKKEISEISWHRLDELQLLSNDVISRGANGLKLYMVGPFLVP
LKEWISKHQPATAQKSDASLKGACVWKAKNNSLGGTSASEALLIRPGSEIYMVDSGPGKS
FRNFRFDTAQILRSMEAVFSAT
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtatccatcgatcttcaagcactcccatgagaaatatacttcctcctcaagag
ctcctcgacgatctatgcagtcgatttgttctgaatgtaccacaagaagacctacaatcg
ttcgagaggattttatttctagtggagcaagcacattggttctatgaggacaactcgatg
gagcaaaatccattactgaaggctctctcacttagagaattcacatctttgatgtttaat
agctgtgctgcactgaggccttatattgcacacattgatgacatatacaaggacttcact
tcctataaggttcgagttccagtaactggagcaataattttggatgaatcttatgaacgg
tgtttactggtgaaaggttggaaagctggagcaagttggagttttccccgtggaaaaaag
aataaagatgaggaagatcatacttgtgccatccgagaagtcttggaggaaacaggttat
gatgtttccaagcttttgaaaatggatgagtacattgaagttacaattggacaacagagg
gtgcggctctacataattgctggtgttaaggaagatactgtctttgcaccactaaccaag
aaggagatcagtgaaatttcatggcaccggcttgatgaacttcagctgctcagcaatgat
gtaatatcacgtggagccaatggcctgaagctttacatggttggccctttcttggtgcct
cttaaagaatggatttcgaaacatcaaccagccacagctcaaaaatcagatgcatctctc
aaaggggcgtgcgtgtggaaggcgaagaacaattctttgggaggcacatcagccagtgaa
gctctgttgatcagacctgggtcggagatttatatggttgattctggccctggtaaaagc
tttagaaatttcaggtttgacacagctcagatcctaaggtcaatggaggctgtcttctct
gctacctaa
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