Magnolia sinica: 131246069
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Entry
131246069 CDS
T09699
Name
(RefSeq) vacuolar sorting protein 3 isoform X1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
msin
Magnolia sinica
Pathway
msin04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
131246069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131246069
Membrane trafficking [BR:
msin04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
131246069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Vps39_C
Clathrin
Vps39_1
CNH
TPR_Vps41
P16-Arc
Motif
Other DBs
NCBI-GeneID:
131246069
NCBI-ProteinID:
XP_058101913
LinkDB
All DBs
Position
5:complement(59061911..59090848)
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AA seq
998 aa
AA seq
DB search
MILAHHPMAKPHPKDRTVLEPFAEFDPSKTSPLSSPSLSISAISLSSQNLIHVGTKDGKL
ILLSSNTSTLPNPNQDSISTVGPLRSLSITDRPIDSIHTFGEIDRVLILSDGALFLVDSL
LLQPVRKLNLPKGVLAVAKRLCHADSASLDWAVDGGSSIQRSQRLLQKLGGGIWVNGTKS
RASELQRNGNSVAAVAAVGKKLILIEVDAGGSSVILKEIQGIDGVKTMVWLDESIIVGTV
NGYALFFSSTGQGNLIFSLPESSGLPCLKSLWRDKQAILLVDNVGIVVSDQGQPVGGSLA
FRHAPDSVGEVGPHVIVVKDGKMDLYHKRMGVHVQSVLFAGEGVGRCVVAVEESGIGDIV
VVATPSKVICFRKVSVEEQIKDLLRKKNFKEAIHLVEELECEGEMTKEMLSFVHAQVGFL
LLFDLHFEDAVNHFLQSETMQPSEIFPFIMRDPNRWSQLVPRNRYWGLHPPPVPLEDVVD
DGLMAIQRAIFLRKAGVDTVADEDFLLNPPSRADLLESAIQNIIRYLQVSRDKDLNSSVK
EGVDTLLMYLYRALNHIDEMEQLASSPNSCVVEELETLLDDSGHLRTLAFLYASKGMSSK
ALAIWRILARNYSAGLWKDPTAERDSRDNCTSLISGQMIAAIEASKLLEEISDQDIVLQH
LGWIADIDQELAVRVLTSEKRANQLSPEEVLAAIDSKKVEIHQRYLQWLIDDQDSDDIRF
HTLYALSLAKSAIDAVEMESLSQNPNALKLAEANISDFESRIISRNPVRERLQLFLQSSD
LYDPEEVLYLIEGSELWLEKAILYRKLGQETSVLQILALKLEDSDAAEQYCVEIGRQDAY
MQLLDMYLDPQDGKEPMFKAAVRLLHKHGESLDPLQVLETLSPDMPLQLASDTLLRMLRA
RVHHHRHGQIVHNISRAINVEANLARLEERSRNVQINDESLCDSCHARLGTKLFAMYPDD
SVVCYKCFRRLGESTSVSGRDFKRDIIFKPGWLVNRQT
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgatcctggcccaccatcctatggccaagccccaccccaaagatcggacggtcctcgaa
cccttcgccgaattcgacccctcaaaaacctctcctctctcctcgccttctctttccatc
tccgccatctccctctcttcccaaaacctaatccacgtcggcaccaaagatggaaaactc
atcctcctctcatcgaacacttccaccctaccaaaccccaaccaagactccatctcgacc
gttggtcccctccgatctttatccattacggaccgtcctatcgattcgatccatactttc
ggtgagattgatcgggttctaatactctccgacggggctctgttcttggtggattcccta
ctgctgcagcccgtacggaaattgaatcttccaaaaggtgtcttggccgttgccaagaga
ctatgccatgctgactcagcgagtctcgattgggctgtggacggcggtagcagcatccaa
cggtctcaacggcttcttcagaagctaggcggggggatttgggtgaatgggacgaaatct
agggcttccgagctgcagagaaatgggaattctgttgctgctgttgcagcagtggggaaa
aagctgatcttgatcgaggttgatgcaggtggctcttctgttattttgaaggaaattcag
ggcattgatggagtcaagaccatggtgtggctggacgagtcgataatcgtcgggactgtt
aatggctatgcgttgtttttcagcagtactggacagggcaatttgatattttcgcttccg
gagtcatctgggcttccatgcttgaaatctctatggagggacaagcaggcgattttgttg
gtggacaatgttggcattgttgtgagtgatcagggccagccggtaggtgggagcttggct
ttcaggcatgcaccagattctgtcggggaggtgggcccacatgtgatagttgtgaaggat
ggtaagatggatttatatcacaagagaatgggcgtccatgttcaatcagtgttgtttgca
ggggaaggagttggccggtgtgttgtggcagtcgaagagagtggaattggtgacattgtt
gtggttgcaacaccttctaaggttatttgctttcggaaagtatctgttgaggagcagatt
aaagatctgttgaggaagaagaattttaaggaagccatccatttggtagaggagcttgag
tgtgaaggtgaaatgacgaaggaaatgctttcctttgtgcatgctcaagtgggctttctc
ttactttttgacttgcatttcgaggatgctgtaaatcatttcttgcagtcagaaaccatg
cagccatctgaaatctttccatttataatgcgagatccaaaccgctggtcacagctggtc
cccaggaatcgctattggggcttgcatcctcctcctgtacctcttgaagatgtcgtggat
gatggattgatggcgatccagagagctatatttcttagaaaagcaggtgtagacactgta
gcagatgaagattttcttttgaatccaccaagtagagctgatttgttggagtcagcgatt
caaaacattatcaggtatctacaagtttcccgggataaagatttgaattcttcggtgaag
gagggagttgatactcttctaatgtacctttatagagctctgaatcatatagatgaaatg
gagcagctggcgtcctccccaaacagttgtgttgtggaggagttagaaactctgttagat
gactctgggcatttacggacgcttgccttcctgtatgcaagtaaagggatgagctcgaag
gctcttgcaatctggcgtattttggcgagaaattattcagctggcttatggaaagaccca
actgcagaaagagactctcgagataattgtacaagtttaatctctggccaaatgatagct
gcaattgaagcatcaaagcttctggaggagatatctgatcaagacatagttctacaacat
ctaggatggattgcagatatagaccaagaactggcagttagagtattaacatcagagaaa
agggccaatcagctttcaccagaagaagtacttgctgcaattgactcaaaaaaggttgag
attcaccaaagatatttgcaatggttgattgatgaccaagactccgatgacattcggttt
catacgttatatgctctttcccttgccaaatcagcaattgatgctgttgagatggaatca
ttgtctcagaatcccaatgctctcaaattagctgaggcaaatatttctgattttgaaagc
cgaatcatctctagaaatccagtcagggagagattgcagttatttttacaatcttcagac
ttgtatgatccagaggaagttctttacttgattgaaggatcggaattgtggttggaaaag
gcaatcctgtacaggaagctgggacaagaaacatcggtgctccagattttagccttgaag
ctggaggacagtgatgcagcagagcaatactgtgtagagattggtagacaagatgcatat
atgcagttgcttgatatgtatttggatccacaagatgggaaggagcccatgtttaaggct
gcagttcgcctgcttcacaaacacggagaatctttggatcctcttcaagtgctagagacg
ttgtcccctgatatgcctctacaacttgcctcagatacgttgttaagaatgttaagagct
cgtgtgcatcatcatcgccacggacagattgtgcataatatctcgcgtgcgataaatgta
gaagcgaatttagcgagattagaggagagatcgaggaatgtgcagatcaatgatgagagc
ctctgtgattcttgccatgcccgcctcggtaccaaactgttcgccatgtatccggatgat
tccgttgtctgttacaagtgtttccgtcgcctaggcgagtcgacatctgtcagtggacgt
gatttcaagagagatatcatattcaagccaggttggctcgtcaacagacaaacttga
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