Magnolia sinica: 131246166
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Entry
131246166 CDS
T09699
Name
(RefSeq) autophagy-related protein 16
KO
K17890
autophagy-related protein 16-1
Organism
msin
Magnolia sinica
Pathway
msin04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
131246166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131246166
03029 Mitochondrial biogenesis [BR:
msin03029
]
131246166
Membrane trafficking [BR:
msin04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
131246166
Others
Rab GTPases of specific organelles
Auto phagosome
131246166
Mitochondrial biogenesis [BR:
msin03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
131246166
BRITE hierarchy
Motif
Pfam:
WD40
ATG16
ANAPC4_WD40
WDR54
NBCH_WD40
eIF2A
Nup160
RAB3GAP2_N
Cytochrom_D1
PQQ_2
TSC22
Fzo_mitofusin
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
131246166
NCBI-ProteinID:
XP_058102057
LinkDB
All DBs
Position
5:76392925..76456995
Genome browser
AA seq
509 aa
AA seq
DB search
MTAQGNAKIAIEHALKALRKRRLLEEGAHAPAFIALSQPFASQGSEWKEKAENLELELQQ
CYKAQARLSEQLVVEVAECRASKAMVQEKEVAITDLQNEVSQSREECSRLKEVLEEKIEA
LELVIEENQTLKAQLEEVTTKAKNAEAENKMLIDRWMLQKMKDAERLNEANALYEDMMDQ
VKASSIQQLARLQVDGVIRQSEVGAENFVESTIPTTCKHKLSAHTGGCGSLLFEYNTDKL
ITGGQDQTVKIWDTKSGTLSSTLYGCLGSVLDLSITHDNRSVIAASSSNNLFVWDVGSGR
VRHTLTGHADKVCAVDASKVSSRNVVSAAYDRTIKVWDLQRGYCINTLISYSNCNTLCFS
MDGQTICSGHVDGNLRLWDIQTGKLISEVAAHAQPVTSISLSHSGSIVLTSGRDNLHNLF
DVRSLEVCGTLRANGNKVASNWSRSCISADDSYVAAGFSDGSVYVWSRSGADIVSTLKGH
TAPVLSCSWSWLGKPLASADKNGTVCIWT
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctcaaggaaacgcaaagattgccatagaacacgccttgaaagctctgcggaag
cgacgattgcttgaagaaggcgctcatgctcctgctttcatcgccctctctcagcctttc
gcttctcaggggtcagagtggaaggagaaggctgaaaaccttgaattggaacttcaacaa
tgttacaaagctcaagcacggttgtctgagcagcttgtggtggaagttgcagaatgtaga
gcctcaaaagcaatggttcaagagaaagaagttgctatcactgatctgcaaaacgaagtt
tcacaatcaagggaggaatgctctcgattaaaggaggttttagaagaaaagatagaagct
ctagaactggtgatcgaagagaaccagactcttaaagcacaactagaagaggttacaaca
aaagctaaaaatgcagaagctgaaaacaagatgttgattgatcgttggatgttgcaaaag
atgaaggatgctgaacggcttaatgaggctaatgcattatacgaagacatgatggatcag
gtcaaggctagcagcatacaacaacttgcacgactacaagttgatggtgtaatccgccaa
agtgaagtaggtgccgagaactttgtggaatcaactattccgactacatgcaaacacaag
cttagtgctcacacaggcggttgtggttcccttttgtttgaatacaatactgataagttg
attactggaggccaggaccagacggttaaaatatgggatacaaagagcgggacactgagc
agcactctttatggttgccttggttctgttcttgatctctccattactcatgataacaga
tctgtcattgcagcaagcagctcgaacaacttgtttgtgtgggacgtgggatccggtcgt
gtccgtcatactctaacaggccatgcagataaggtctgtgctgtcgatgcaagcaaagtt
tctagccgcaatgtagtgagtgctgcttatgatcgaactataaaagtatgggatctgcag
agaggttattgcatcaacaccctcatctcatacagcaactgcaatactctttgcttcagc
atggatggtcaaaccatatgctcgggtcatgttgatgggaaccttcgtttgtgggatatt
cagacaggaaagctaatcagtgaagttgctgctcatgcacagcctgtcacatcaatctct
ctatctcatagtggtagcattgtgttgactagtgggagggacaatttgcacaatcttttc
gacgtgcggtctctagaagtttgtggcacactaagagcaaatggcaacaaagtggcatcc
aattggagccgttcatgcatcagtgctgatgacagctatgtcgcagcaggattctccgat
ggctctgtttatgtttggtcaagatcaggggcagacatcgtgagcactctaaagggacac
actgctcccgttctttcatgttcatggagttggctaggaaagcccctagcatctgctgat
aagaatggaactgtgtgcatatggacatga
DBGET
integrated database retrieval system
