Magnolia sinica: 131246183
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Entry
131246183 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131246183
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
msin
Magnolia sinica
Pathway
msin03015
mRNA surveillance pathway
msin03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131246183
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
131246183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131246183
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
131246183
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
131246183
NCBI-ProteinID:
XP_058102075
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All DBs
Position
5:79851781..79875135
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AA seq
655 aa
AA seq
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MDPMGEEQLDYEDDEYGGSQKLQFQGSGAISALADEELMGEDDEYDDLYNDVNVGEGFMQ
SMQRNEMPVSLGGVGNGGHQGQKVDGGPGLRVSEPVVSQEVSIPGVGVGGKESNVGAAGF
SDEQKKTTSLSGKGLEDRTSDYPAGVSQKGRVLDIAPEPQVGNSGFQGSMPVMPNVVADP
GQVPARFVGGPSSFPDQASGGARSGPPMAINQVGTGVNRPVVNDNTIRPVVGSVENGTAT
LFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDSTAAAACKEGM
NGHVFNGRACVVTFASSQTLRQMGASYMHRTQAQAPSQPQGRRPMNDGVGRGTGMNYQGG
DGGRNYGRAGWGRGGQGLLNRGQGGPMRGRGSMGGRGMVGNTGGVGSGTTGGPYGQGLVG
PALGGPTGGLMHPQSMMGAAFDPTYMGRGTAYGGFPGPAFPGMMPSFPAVNTVAVPGVAP
HVNPAFFGRGMPANGMGMMGSTGMDGHTGMWTDASMTGWVGDEQGRRTRESSYGGDDVAS
DYGYADASHERGGRSNAPREKDTRGSERDWSGNSERRHRDEREQDWDRSDRDRDRYRDEK
DGYRDHRQRDRDWDNEEDWDRGQSSRSRSKSRMMQEEDHRSRSRDADYGKRRRSD
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggatccaatgggtgaagaacaattagattatgaggatgatgagtacgggggaagtcag
aaactgcagtttcagggcagcggagcgatctctgcacttgccgatgaggagctaatgggg
gaagatgatgagtatgatgatctttacaatgatgtgaatgttggtgagggtttcatgcag
tcaatgcaacggaatgagatgccagtttcattaggtggtgtgggaaatgggggacaccaa
ggccagaaggtcgacgggggccctgggttgagggtttcagagcctgttgtgtcgcaagag
gtgagcatccccggtgttggggtgggagggaaggagtcgaatgttggtgctgccggtttc
tccgatgaacagaaaaagacaacatctttgtctggcaaaggtttggaagatagaactagt
gattacccagctggggtttctcaaaaaggtcgtgttttggatatagctcctgagcctcaa
gtaggaaattcaggatttcaaggatccatgcctgttatgccaaatgtcgttgctgatcct
ggtcaagtgccagcaaggtttgttggtgggccgtcttcatttccagatcaggccagtggt
ggtgccagaagtggtcccccgatggcaatcaatcaagtgggaacaggtgtgaacaggcca
gtggtcaatgataacacgatcagacctgtagtaggttctgtagagaatggcacagctact
ctatttgtgggagaattgcattggtggactactgatgcagagcttgagagcgtcttgtct
cagtatggtagggtcaaggaaatcaagttctttgacgagagagccagtggaaaatcgaaa
ggctattgtcaagttgagttctatgattctactgcagcggctgcttgcaaggaagggatg
aacggtcatgtgtttaatgggcgggcttgtgtggtgacatttgcttcatctcaaactttg
aggcagatgggtgcttcttatatgcacagaacccaagcacaagctccatctcagcctcaa
ggaaggagaccaatgaatgatggggttggtagaggtactggaatgaattatcagggagga
gatggcgggaggaattatggtagggctgggtggggtcgaggtggtcagggattacttaat
agagggcaaggtggaccaatgaggggaagagggtctatgggaggaaggggaatggttgga
aatacaggtggggttggaagcggcaccactggaggcccttatggacagggccttgtgggc
cctgcattaggtggtcccactggggggctgatgcatccacagagcatgatgggtgctgca
tttgatccgacatatatgggccgaggaactgcttatggggggtttcctggacctgctttt
cctgggatgatgccttcgtttcctgccgttaatacagttgctgttcctggagtcgcacca
catgttaatccagctttctttggccgaggaatgcctgcaaatggaatgggaatgatgggt
agcaccgggatggatgggcatacagggatgtggacagatgcaagcatgactggatgggtg
ggagatgaacaggggagaaggactagggaatcgagttatggtggtgatgatgtagcatct
gattacgggtatgcagatgcaagccatgaaagaggaggaagatcaaatgccccacgagag
aaggacacaaggggttccgagcgcgactggtcagggaattccgaaagaaggcatcgtgat
gagagggaacaggattgggacaggtcggatagggatagagaccggtacagggatgaaaaa
gatgggtacagggaccacaggcagagggatcgcgactgggacaacgaagaggactgggat
agagggcaatcctcaaggtctcgtagcaaatcgcgtatgatgcaagaggaagatcacagg
tctcgatctagggatgcagactatgggaagaggcggcggtctgactga
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