Magnolia sinica: 131246717
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Entry
131246717 CDS
T09699
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131246717
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
131246717
Surveillance factors
Other surveillance factors
131246717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
131246717
NCBI-ProteinID:
XP_058103053
LinkDB
All DBs
Position
5:111648881..111670102
Genome browser
AA seq
1648 aa
AA seq
DB search
MAGSKVNLPEDLISWKSSDGQSNTKDASGGNNDEKVLMGFLDDSKDQVTSESSIPLSPQW
LYSKPSESKAGLLATLGDMRAPTSLPHGHSIDPIQKEVWRLDGSQDKKERRRNGPETEGS
RRWREEERETGLLGRRDRRKEGDRENEYRKSDRRADIASNKETTETRSLPSSDRWNDVTS
RTSGNETRRDSKWSSRWGPEDKEKDSRTEKRIDVEKEDAQNEKQSSVTNNRAAPENGTDS
RDKWRPRHRQEVHSGGSTVYRAAPGFGLERGRVEGTSVGFAPGRGRSNLAGSRLSSAGPI
GAVPGSKSEPGHGKSGPSADAFCYPRGKLLDIYRKHKLLPSFDTVPDWLEEVSPITQSSS
IEPLAFVAPDAEEEAVVDDIWKGKISSSEASHNNTIRDKMGRANNNEKGLGDLTLSESKH
GVLPTTNTKETGSSVGEHENKVTAPTDGTDSSVRALLVSKSNDFGSNVVTGHKVDENSMV
NGDAHMENSTPLNHPKFEDVKTAASFDIGTKLPDDSNSLFDMHSLLEILDNEQNLKTNVQ
VKQLEHGVQPEELSLFYRDPQGEIQGPFWGVDIISWFGQGFFGTDLPVCLSDAPEGTPFQ
ELGEVMPHLKLTAQSLSGINSGNEAEISNTIECNIEASTLAPDFTGSAVINEQQWPLHEF
EGLSDHVQPIRSEHEDHTEPHYGRLLPSGLDNSANILNDGRRSFHELVANDAEEVFFPGR
PRSSGGNPLGKQAGNIHDPLRNSTRHFLENEIRETIMLDHGGLKGNNLHPFGLSWSELEG
TNIKHSQSSNTSGVGDQGHLVHAMGGRDTPLFSLNRNSFSALPDPPVVGETWPDNYRRNT
LASSSELHDAMDARHLSHLEQESIRLDLAEHVLSQQLHKQQLQQQNLLSSHPSMHLNGSV
VEQLPSASSVQRFNPVHQQSIGQAVPDLEQLLKLQIQQQRQFQLQQQYQLQQQLHHHQLQ
LQQQQQQQSQVEQLLLDQFIHHNDPGFGPLRVDRQMSSMLDEALFRQQHLHELQQHPHPA
RHHEQLIQAKFGQSLHPEHHNHLLELLAHERHGRMLPVEQQLLIDIQREQLQAQQFTAAL
RQQQGMEEERRAGGVWSVDESGRFVMAAANPHQTHSPGFSHLDYHQQQRPSSGEQTRNLE
RNLALHELLQRGLYEPSSLPFERSISFPAVSSGVNMDLANALARVQGRELQEQAQMHSAG
QMGPFSSRVHPHHPQIPNQIHASQLDVLESQIQQLHLEAERKKRDSEVNLVYEDLSSWAS
TIGNDEISKRAVTEFLHKKMSLPSSQSLELGEGATSPHERRDPSWAVSASASDHPYNIFT
AQVGLGDSFSERPHGVNLVHALPEHLVNAGMEEKDSSIGTTESSQFICNSGAFVEDKRFF
IGMNEMGQAIYSDSNSTDKPSVDRMDSLEVESMKGKNWGSKSKAGKVPVKEAQESAVEKA
GAAVADHGELLGYTPSRHASLGNAGGNVGFYKCDMGVDNAYGDDMGKNRVSAAFPKGPDN
SSMNYSNVRVSSSQEALYELASSSTVIGKNPVNFAASNDGRRDLGGNPTTRASETEASTR
KDMRFCRTLSCSETDIAEPLFIDMLRKPVPEVDAAAITGTSDSSDVTQASRNSSKKKGKK
GRQIDPALLGFKISSNRIMMGEIQRLEE
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggccggaagcaaggtcaatctgccggaggatctcatctcctggaaatcgtccgacggg
caatcgaacaccaaagatgcctctggaggaaacaatgatgagaaggttcttatggggttt
cttgatgactccaaagatcaagtaacatctgagagcagcatacctttgtctcctcaatgg
ctgtattccaaacccagcgaaagtaaggctggtcttttagcaacattaggggacatgcgt
gcaccgacttctttgcctcacggtcactccatagatccgatacagaaagaggtgtggcgc
ttggatggatctcaagacaagaaagaacggcgaaggaatggtcctgagactgaaggcagt
cgccgctggcgtgaagaggagagagaaactggcttacttggtaggagagatcgcagaaaa
gaaggagatagagaaaacgaataccgcaagagcgatcgacgtgctgatattgcttcaaat
aaagaaaccactgaaactagatccttgccttcatcagataggtggaatgacgtaactagt
cgtacttctgggaacgaaacacggcgagacagcaagtggtcatcaaggtggggtccagaa
gataaggagaaggactcccgaactgagaaaagaatcgatgtggagaaggaagatgctcaa
aatgaaaaacagtcctctgtaaccaacaaccgtgcagctcctgagaatggaactgattct
cgcgataaatggaggccacgccataggcaggaagttcattcgggtggttcaacagtttac
cgtgctgctccaggatttgggctggagagaggaagggtggaggggacaagtgtgggattt
gctccaggacgagggaggtcaaaccttgctggtagcaggctttcctctgcaggtcctatt
ggtgctgtgccaggcagtaagagtgaacctgggcatgggaagtccggcccatctgcagat
gcattttgctacccaagaggaaaactacttgatatttacaggaaacacaagctccttcct
tcttttgatacagtccctgattggcttgaggaagtttcacccattacgcaatcgagctct
atagagcctttggcgtttgttgcaccggatgcagaggaggaggctgttgtagacgatatc
tggaaagggaaaatcagcagcagtgaagcaagccataataataccatcagagacaagatg
ggaagagccaacaacaatgagaaaggtctaggtgatttgactttgtctgagagcaaacat
ggtgtacttcctacaactaacactaaagagactggctctagtgttggagaacatgaaaat
aaagttacagccccaactgatgggacagattcgagtgtcagggctctgttagtttccaag
agtaatgatttcggtagcaatgttgtcacaggacataaagttgacgagaatagcatggta
aatggtgatgcacatatggaaaattcgacgcctctcaaccatcctaagtttgaagatgtc
aaaacagctgcatcttttgatattggcaccaagctaccggatgattcaaattctctattt
gatatgcattctctccttgagattcttgataatgagcagaatttaaaaactaatgtccaa
gtaaagcagttagaacacggtgtccaacccgaggagttgagtttgttttaccgggacccc
caaggagagatacagggtccattttggggtgttgacattatttcatggtttggacaggga
ttttttggcactgacttacctgtatgtctgtcagacgctcctgaaggaacaccttttcag
gaacttggggaagtcatgccacatttgaaacttacagcacagtctctatctggtatcaac
agtggcaatgaggcagaaatatctaatactattgagtgcaacattgaagctagtacactt
gcacctgattttactggctctgctgtcataaatgaacaacagtggccactgcatgaattt
gaaggtctttcagaccatgttcagccaataagatccgaacatgaagatcatacagaacct
cattatggtaggctgctgccttctggtttggataattcagccaacattctcaatgatggg
aggagaagctttcatgaattagttgcaaatgatgctgaagaagtgtttttccccgggagg
cccagaagtagtggtgggaatcctttggggaaacaggctggtaacattcatgatcctttg
aggaattctactcgccattttctggaaaatgaaatcagggaaactatcatgctcgatcat
ggaggtttaaagggaaataatttgcacccttttggactatcatggtctgagctggaagga
actaatataaagcattcccagtcatcaaatacttctggagttggcgatcagggccacctt
gtacatgccatgggaggaagggacacccctcttttcagccttaatcggaattctttcagt
gcattacctgacccccctgttgttggggagacatggcctgataactatagaagaaacaca
cttgctagctcgagtgaacttcatgatgctatggatgctcgtcacctgtcgcacctggaa
caagaatccatccgtttggatctagcagagcatgtgctgtcacaacagttgcacaagcaa
cagcttcagcagcaaaatctgctctctagtcatccttctatgcatttgaatgggtctgtc
gtagagcagttgccgagtgcatcttctgttcagagatttaaccctgttcaccagcagtcc
attggtcaagctgtgccagatttggaacaacttttgaagctccagattcaacagcagcgg
caattccagctgcaacaacagtatcaattgcagcagcagcttcatcatcaccaattacaa
ttgcagcagcagcagcagcagcaatctcaggttgagcagttgcttcttgatcagtttatt
catcacaatgaccctggctttgggccactgcgggttgaccgtcaaatgagcagcatgctt
gatgaagctctatttaggcagcagcacctgcatgaactgcagcaacatccccatcctgca
aggcaccatgagcaactcatacaggcaaagtttggccagagcctacatccagagcatcac
aaccatcttttggagttactagcacatgaaaggcatgggcggatgcttccagtggaacaa
cagcttcttatagatattcaacgagagcagctgcaggcacagcagttcactgctgcattg
aggcagcagcaaggcatggaagaagagaggcgtgctggtggggtctggtcggttgatgaa
tctggtcggtttgtcatggcagctgctaatcctcatcagacccattctcctggatttagc
cacttagattaccaccaacagcagaggccttcttctggtgaacaaacaagaaatcttgag
cgaaaccttgccttacatgaactactgcagcgaggtctttatgaaccaagctcattgccc
tttgagaggtcaatctctttccctgctgtttcttctggggtgaacatggaccttgcaaat
gctctagcccgggttcaagggagagagttgcaggaacaggctcagatgcattctgctggt
cagatgggcccattttcttctcgtgttcaccctcatcaccctcaaattcctaaccagatt
catgcttcacagctggatgtgctagaatcacagattcagcagttgcatcttgaagctgag
cggaagaagagggattcagaagtaaatctcgtttatgaggatctgagttcatgggcatct
accataggcaatgatgaaatttcaaaacgggcagtcactgagtttctccataaaaagatg
agcctgccttctagccagtcactagaactgggtgaaggtgctacttcacctcacgaaagg
agggatccctcttgggctgtttctgcttctgcttcagatcatccatacaatatttttact
gctcaagttggtctgggtgattcattttcagaaaggcctcatggtgttaatttggtgcat
gcattgccggagcatttggtgaatgcaggaatggaagaaaaagatagcagtataggaact
actgaaagctcacaatttatatgcaattctggagcatttgttgaagataaacggtttttt
attggtatgaatgagatgggccaggccatttattcagattcgaattcgactgataagcca
tctgtggatcgaatggactccttagaagtggagagcatgaagggtaagaactggggatct
aaaagcaaggcggggaaggtaccagttaaagaggctcaagaaagtgcagtggagaaagca
ggagctgctgttgctgatcatggagagctactgggttacacccctagtaggcatgcttca
cttggcaatgctggtggaaatgtgggcttctacaagtgtgacatgggagtggataatgct
tatggtgatgatatgggtaagaatagggtttctgccgcctttcccaaaggacctgataac
tcttcgatgaattactcaaatgtacgggtttcatcatctcaggaggcattatatgagctg
gcctcttcctccacagtcatagggaagaatccagtcaactttgcagcttccaatgatgga
agaagagaccttggtgggaacccgacaacccgggcttctgaaactgaagcctccaccaga
aaagacatgcgcttctgcaggacattgtcttgcagtgagacggacattgctgagccattg
ttcatagacatgctcaggaagccagtaccagaagttgatgctgctgccatcaccggaact
tcagactcatccgatgtcactcaggctagtagaaacagcagcaagaagaaagggaagaaa
ggcagacagattgaccctgcccttctcggttttaagatctcgagcaaccgcatcatgatg
ggtgagattcaacgtctggaagaataa
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