Magnolia sinica: 131246764
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Entry
131246764 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131246764 isoform X1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
msin
Magnolia sinica
Pathway
msin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131246764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131246764
03041 Spliceosome [BR:
msin03041
]
131246764
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
131246764
Spliceosome [BR:
msin03041
]
Complex B
Other components
Prp19-related factors
131246764
Complex C
131246764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
Mad3_BUB1_I
TPR_15
TPR_2
TPR_8
PPR
Motif
Other DBs
NCBI-GeneID:
131246764
NCBI-ProteinID:
XP_058103135
LinkDB
All DBs
Position
5:112655608..112672479
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AA seq
818 aa
AA seq
DB search
MSTASSEAKSRPSISPELCLTDADLPYEEEILRNPFTLKLWWRYLIARSTAPFAARSVLY
ERALRALPGSYKLWHAYLLERLESVRSLPVTHPNYSSLNNTFERALVTMHKMPRIWTMYL
ESLTHQRLLTRTRHTFDRALRALPVTQHDRIWGPYLAFVSQQGVPVETSLRVYRRYLKFD
PTHIEDFIEFLINSKLWQEAAEHLASVLNDDGFYSIKSKTKHQLWLELCDLLTCHANEVS
GMNVDAIIRCGIRKFNVEVGCLWTSLADYYIRRGLYEKARDVFEEGLITVVTVRDFSVIF
DCYTMFEESATNAKMETMGDSDDEEDGQEEDGSVDVRLGLSLSVEKLGKRILAGFWLNDD
NDLDLRLARLDHLMNRRPELVNSVLLRQNPHNVEQWHKRVKLFEGNPTRQILTFTEAVRT
VDPMKAVGKPHTLWVAFAQLYENHNDVANARVIFEKAVQVDYKTVDHLASVWCEWAEMEL
RHKNFKGTLELMRRAMAEPSVEVKRRVAVDGHEPVQMKLHRSLRVWTFYVDLEESLGTLQ
STRAVYERILDLKIATPQIIINYALLLEENKYFEDAFKVYERGAKIFKYPHVKDIWVTYL
SKFVKRYGKTKLEQARELFKHAIKMTPAEDVKPMYLQYAKLEEDYGLAMRALEVYEQATK
AVPENEKMNIYEIYIARAAEIFGVPSTREIYKQAIESGLPDKDAKSLSMKYAEVEKSLGE
IDRARLIYAHASHFADPRFASDFWNKWLEFEVQHGNEGTFREMLRRKRSILAGSSQPRII
LPEYLMQKDQKPNLEEETVDTLKSHSGALERIKRPRLQ
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggcatcatcagaagcaaaatcccgtccgtccatctcccccgaactctgcctc
accgatgcagacctcccctacgaggaggagatcctccgcaaccccttcaccctcaagctc
tggtggcgttacctaattgcccgttccaccgccccctttgctgcccgctccgttctttat
gagcgggccctccgtgctcttcccggcagctacaagctatggcacgcctacctcctcgag
cgcctcgaatccgtccgttccctccccgtgacccatcccaactactcctccctcaacaac
accttcgagcgggccctggtcaccatgcacaagatgccccgcatctggaccatgtatctc
gaatccctgacccaccagcggctcctcacccgcacccgccacaccttcgaccgtgccctt
cgtgccctgcccgtcacccagcacgatcgcatttggggcccatacctcgcattcgtcagc
cagcagggcgttcccgttgagacctcgctccgcgtctaccgccggtacctgaaatttgat
cccacccacattgaggacttcattgagttcctcatcaattccaaactctggcaggaggct
gccgagcacctggccagcgtcctcaatgatgatgggttctactcgatcaagagcaagacc
aagcaccagctctggctggagctctgcgatctcctgacctgccacgcgaacgaggtgtct
gggatgaacgtggatgcgatcatccgctgtgggatcaggaagttcaatgttgaggtgggt
tgcctctggacatcgctcgcggattactacatacggcggggattgtacgagaaagcacgg
gatgtattcgaagagggcctgataacagtcgtcactgtgcgggacttcagcgtgattttt
gactgctatactatgttcgaagagagtgcaaccaatgccaagatggagacgatgggggac
agcgatgatgaggaggatggccaggaagaagatggctcagtcgatgtacggttgggtttg
agcctgtctgttgagaagctcgggaagcggattttggctggattttggctgaatgatgat
aatgatttggatttgagactggcaaggctggatcatctcatgaatcgacggcctgagctt
gtgaacagtgtattgcttcggcagaatccacacaatgtggagcaatggcacaagagggtg
aaactgtttgagggtaatccaacacggcagattctgacatttactgaggcggtgaggact
gtcgaccccatgaaggctgtggggaagccccatacgttgtgggttgcatttgcccagttg
tacgagaaccacaatgatgtggccaatgcgagagtgattttcgagaaggctgttcaggtt
gattataaaacggtggatcacttggcgagcgtgtggtgtgagtgggcagagatggagctg
aggcataagaattttaaagggacgttggagttgatgaggcgggccatggcagagccctca
gtggaggtcaagcggagagttgctgttgatgggcatgaaccggtgcagatgaagctgcat
agatcgttgagggtgtggaccttttatgtggatttggaggagagccttggaacactgcaa
tctactcgtgcagtctatgagcggatactcgatttgaaaatagccactccacaaattata
attaactatgcattgcttctagaggagaataaatactttgaagatgcattcaaggtatat
gaaagaggtgcaaagatatttaaatatccccatgtcaaggatatttgggtcacatacctc
tccaaatttgttaaaaggtatggcaaaacaaagctagagcaggcaagagagttgttcaag
catgcaattaaaatgacacctgctgaagatgttaaaccaatgtacctacaatatgcaaag
ctggaagaggattatgggcttgcaatgcgtgcattggaagtctatgagcaagctacgaag
gctgtccctgaaaatgaaaaaatgaacatctatgaaatttacatagctcgtgcagccgaa
atttttggtgtcccaagtacgagggaaatatacaagcaagccatcgaatctggtctcccg
gataaggatgcaaaatctctgtctatgaagtacgctgaggtagaaaagagcttgggagaa
atcgatcgtgctcgtcttatatatgcacatgcatcacattttgcggatccacggtttgcc
tctgatttctggaacaaatggcttgaatttgaggtgcaacatgggaacgaaggcaccttc
cgagagatgcttcgaagaaagcgcagtatcttagctggctctagccagccacgtatcatt
cttcctgaatatttgatgcaaaaggatcagaagccaaacttggaggaggaaacggtggac
acattaaagagtcattcgggtgcccttgagagaataaagaggccaaggctgcaataa
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