Magnolia sinica: 131246980
Help
Entry
131246980 CDS
T09699
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msin
Magnolia sinica
Pathway
msin00040
Pentose and glucuronate interconversions
msin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131246980
Enzymes [BR:
msin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131246980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131246980
NCBI-ProteinID:
XP_058103415
LinkDB
All DBs
Position
5:complement(19797716..19800314)
Genome browser
AA seq
394 aa
AA seq
DB search
MATLTFHLILSCVLVWWAFQAYSLDLPKTSTYYGSNLWPTYGTKVMNKIDGCWRSDPNWA
SNRRALADCAVGFGKDVLGGKYGAIYVVTDPSDDPINPKPGTLRYGAIQTQPLWIIFKKN
MLITLENELMVNSFKTIDGRGANVEIAYGPCITVAGVSHVIIHGLNIHDCKPGKPGLVRS
TPTHLGRRQGSDGDAISIFASSHIWVDHCSLSHSTDGLIDVIHASTALTISNNYFSNHDK
VMLLGHNDNYAADKVMKITVVFNHFGPGCIERMPRVRFGYAHVANNRYDEWEMYAIGGSA
NPTILSEGNYFDASNNRSSKEVTKRESSGWKNWKWRSSMDMFLNGAYFIQSGWGSAAPGY
SSSQSFTAAQGSMAPTLTADAGTLQCWATRPCIS
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggctacactcacctttcatttgatcctctcttgtgtgctcgtatggtgggcctttcag
gcctactcactggacttacccaagacttcaacctactatggaagcaacctgtggcccacc
tatgggacgaaagtcatgaacaagatcgatggttgttggcggtcggaccccaactgggca
tcgaaccgtcgtgccttggctgactgtgctgtgggcttcggcaaggatgtgctgggtggg
aaatacggagcgatctacgtcgtgaccgacccatctgatgatcccattaatcccaagcct
gggacgcttcgctatggcgccatccaaacacagccattgtggataatattcaagaagaac
atgctcattacacttgagaacgagctcatggtgaacagtttcaagacaatagatggacgt
ggggccaacgtggagattgcttatggaccgtgcattacagtggcaggtgtgagccatgtc
atcatccatgggctgaatattcatgattgcaagcctggaaaacctggccttgttcgtagc
accccgacgcacttgggccgtcggcaagggtctgatggggatgcaatcagcatcttcgca
tcatcacatatttgggtggaccattgttctctgtcccactcaaccgatggcctgatcgac
gtcatccacgcttccactgccctgaccatctctaacaactacttctccaaccatgacaag
gtgatgttgctagggcataacgacaattacgcggccgacaaagttatgaaaattacagtc
gtcttcaatcattttggtccaggttgcatagagagaatgccaagagttcggttcgggtat
gcgcatgtcgcaaacaatcgctacgacgagtgggagatgtatgccataggtgggagcgct
aatccgaccatcttaagcgaaggcaattactttgatgcttctaacaatcgttcctcgaag
gaggtaactaagcgggagagcagcgggtggaagaactggaaatggagatcttcgatggac
atgttcttaaacggcgcctacttcattcaatctggttgggggagcgcagccccgggctac
tcctcgtctcaatcattcactgctgcacaagggtcgatggcgcctactctcacagccgat
gccggcacactccaatgttgggctacaagaccttgtataagttag
DBGET
integrated database retrieval system
