Magnolia sinica: 131247321
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Entry
131247321 CDS
T09699
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
msin
Magnolia sinica
Pathway
msin00040
Pentose and glucuronate interconversions
msin01100
Metabolic pathways
Module
msin_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131247321
Enzymes [BR:
msin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
131247321
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131247321
NCBI-ProteinID:
XP_058103663
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Position
5:59453549..59455649
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AA seq
390 aa
AA seq
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MARRMNYILSPLLLSLFISVNGDLSVTDYGAIGDGKTDASQSFLKAWTAACHSSEPTTIY
VPRKRYQLRPVIFQGPCNNTSITIRVDGILVAPNYQEMGIVDNWIMFSGVQGVSINGNGG
YLDGQGLGLWACKAAGHVCPAGTTSLAFFSSKDVSVSGITSINSELYHIVILTCNNVTLD
GVRIYAPDDSPNTDGIHVQDSTNVRILSTGIKTGDDCISIGPGTQNLWIQRVACGPGHGI
SIGSLGKELKEDGVQNVTVKTVVFNGTLNGLRIKSWARPSYGFVKGVVFEHATMINVANP
IIIDQNYCPNNNDGCPGQESGVKISQVTYKNIKGTSTSQVAMKFDCSSSSPCQGIRLQDI
KLTYHDQLAESFCQNIKGSTSGLVVPPSCF
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgcatgaactacattctctctcccctcttactctcccttttcatctcagta
aacggtgatctcagtgtcacggactatggtgccattggcgatggaaagaccgacgcaagc
caatcgttcctcaaagcatggaccgcagcttgccattcgagtgaacccacgacgatttat
gtccctcgcaagaggtatcaactcaggccggtcatcttccagggcccatgcaataatact
agtattacgattcgggtggatgggatcttggtcgctccaaattaccaagaaatgggcatt
gttgacaattggatcatgttctctggagtccagggtgtgtcaatcaatggcaacggcggg
taccttgatgggcaaggattgggcttgtgggcttgcaaggctgcgggccatgtctgtcct
gctggcacaacgtcacttgccttcttcagttccaaagatgtatcagtcagcggcatcact
tcgatcaacagtgagctctaccacattgtcatcctcacgtgcaacaacgtaacgctggat
ggagtaaggatctatgcccctgatgacagccctaacactgacggcatacacgtccaagat
tcaacaaatgtgcgtatcttgagcacaggcataaaaacgggagatgactgcatctcgatt
ggcccaggcacgcagaacctgtggatccaacgtgtcgcgtgtgggcctggccacggaata
agtatcgggagcctggggaaggagcttaaagaagatggtgtgcagaacgtgactgtaaag
acagtcgtctttaacggaactcttaatggtcttaggataaaatcttgggccaggcccagt
tatgggtttgttaaaggagtggtctttgagcacgccaccatgatcaacgttgcaaatcca
atcatcattgaccaaaattactgccctaacaacaacgacggttgtcctggccaggagtcg
ggcgtgaaaatcagtcaagtgacatataagaacataaagggaacgtcaacatcccaggtt
gccatgaaattcgattgcagctcaagctctccatgccaagggatcagattacaagatata
aagctcacataccatgatcagcttgcagaatccttttgtcaaaatataaagggttcgacc
agtggattagttgtgccgccgagctgtttttga
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