Magnolia sinica: 131247946
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Entry
131247946 CDS
T09699
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
msin
Magnolia sinica
Pathway
msin04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131247946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msin04121
]
131247946
Enzymes [BR:
msin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131247946
Ubiquitin system [BR:
msin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
131247946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
131247946
NCBI-ProteinID:
XP_058103904
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All DBs
Position
6:2762296..2783692
Genome browser
AA seq
306 aa
AA seq
DB search
MVPGSSICEEAPESLAADHQLCTASKELGNFQLTKHSIAPSVKAGVSSTNGVHELLECPV
CTNSMYPPIHQCPNGHTLCSSCKLRVQNHCPTCRYEMGNIRCLALEKVAESLELPCRYQD
LGCTDIFPYYIKLKHEQQCRFRPYNCPYAGSECLVTGDIPSLVAHLKNGHKVDMHDGCTF
NHRYVKSNPHEVENATWMLTVFNCSGQYFCLHFEAFLLGMAPVYMAFLRFMGEDDEAKNF
CYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSYDGLVIHRNMALFFSGGNRQELKLRVMG
RIWKEQ
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggttccaggaagcagcatttgtgaggaagctcccgaatctctggctgcagatcatcaa
ttatgcactgcaagcaaggagttgggaaattttcaactcacaaaacatagcattgctcct
agtgttaaagcaggagtatcttccactaacggcgtgcatgagcttcttgagtgcccagta
tgtacaaactcaatgtaccctcccattcatcagtgcccaaatggtcacacgctatgctca
agctgcaagctcagagtgcagaatcactgccctacttgtcgatatgaaatgggtaacata
agatgtttagctctcgagaaagtggcagagtctcttgaacttccctgtagatatcaggac
cttggatgcactgacatatttccatattacatcaaattgaaacatgagcagcagtgcagg
ttcaggccctataattgtccttatgcaggttctgagtgcctggttactggtgatattcca
tcgcttgtagctcaccttaaaaatggccacaaggtggacatgcatgatggatgcacattc
aatcatcgttatgtgaagtccaacccacatgaggtcgagaatgcgacatggatgctcact
gttttcaactgttctgggcaatacttctgccttcacttcgaggcattcctgttggggatg
gcacctgtttatatggcattcttgagattcatgggtgaggatgatgaggcgaagaacttc
tgttacagccttgaagtgggcggcaacggccggaaactgatatggcaggggataccgagg
agcataagggacagccacaggaaggttagggatagctacgatggtctggtgattcaccgc
aatatggcgctcttcttctccggaggcaataggcaggagctgaagctgcgagtgatgggc
cgcatctggaaagaacagtaa
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