Magnolia sinica: 131248068
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Entry
131248068 CDS
T09699
Name
(RefSeq) ATP-dependent DNA helicase SRS2-like protein At4g25120 isoform X1
Organism
msin
Magnolia sinica
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Peptidase_C37
AAA_11
Motif
Other DBs
NCBI-GeneID:
131248068
NCBI-ProteinID:
XP_058104097
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Position
6:complement(6134922..6178840)
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AA seq
1141 aa
AA seq
DB search
MNKENAWGTPHLEGITEEQRARITQNFRAAKALLARKRPYEATPILRKIYNEKVERHPPE
DVQINNHSPISSNGSGLLDIACNSGSCTKRRPINDGDTSAQFGARIEEITAENGSTLVCV
ITPKKESERCSYSDDFSSPSVLDEDYDETILKEIDALCEQQSTAKKEGHRPQSNVFIESE
CKACDESSADASSNLGAVTADKLQEDDNVAEITAVELEEEGSSSFQATRRGCMPKAYAEY
MQTLNEMQKEAACSDISTPLMIVAGPGSGKTSTMVGRVLTLLKEGIGPTHILAMTFTTAA
ASEMRDRIGAVAGRAIAKELTISTFHSFCLQLCRSHAEKLGRTSEFLIYGHGQQRRAIIE
AVRLMENARKTGPNCGASELEEDSSGISGNAQSFKDKSKKWHKFVTQAKASGKTPMECRT
MGDEIGAAILGNYNDILRSCNALDYHDFISSSVKLLNDFPEVYKECQDTWKAIVVDEFQD
TSAMQYGLLRLLAAHNCITVVGDEDQSIFSFNGADICGFDSFRRDFPAHKEIRLTKNYRS
TRCIVEAASSLIHHNVKRCQLKQVVTDNSSDCKITVKECHNEDAQCAFVVDKILELTSAS
LDTKCSFGNIAILYRRQVSGRAFQTSFRSRKIPFNVHGVAFYRKKVIKAIMAMLRTALPG
CDDGPFRQVFKVLLPGEKEEKKRVIDYIDKIATTRKCSFVSAACDIFGAKISGTFKRSQL
TQGRKVLFTLDMISKLIQREQSISAVITSVVNVLPQKYLLEQRAVVDVEGGKLLNEENDL
RSVLQYLLDDVSDFLSTHFGNAEVGRECTTKEKGCGNVLKAFIDYISSREVENFRTRRRD
NENSVTLTTIHQSKGLEWDAVFIVKANDSEIPLLHEFNGVVKEGGTTLEEERRLLYVAMT
RARKKLYILYVIMDSNWQLLQPSRFLKEIPDHLLEVQAELTRKGLQAKAEDLSKRIVLST
TDVPKHEPSPRAHCPIIQSDGIVSNDSPELTDACNGNSFLRRFNIEDRSTVSHLFHQWAK
KQAFQDPKRLLDKVGFVIDERMRVKTNKNKDVLRALKSFLKCDDAFHYAQYVLRWEQIPA
DQRAHLVKEKQEYFQKQRIENSMGSSAATSKQIAYLQNLGCTIVPTSRLHASRLIEQYKS
L
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggaaaacgcctgggggacgccgcatttggaaggaattactgaagaacaaagg
gccagaatcacccagaatttcagggccgcaaaggcacttctcgctcgtaaaaggccgtac
gaagccacgcccattctccgaaaaatctacaatgagaaagtcgaaagacatccacctgag
gatgttcaaataaacaaccattcccctatctcttctaatgggtccgggttattagacatc
gcgtgcaatagtggatcttgcaccaaaagaaggcctatcaatgatggggacacttctgca
caatttggtgcacggattgaagaaatcactgctgaaaatggatccacgttggtgtgcgtc
atcactccgaagaaagaatccgaacgatgcagttacagtgacgacttttcctcacccagt
gttttagatgaagattatgatgaaacgattttgaaagaaatcgatgctttatgtgaacaa
cagtcaacagcaaagaaggaaggccatcgcccacagagcaatgttttcattgaaagcgag
tgcaaggcatgtgatgagagcagtgctgatgcttctagtaatttgggggctgttactgct
gataaattgcaggaagatgataatgtggcagaaattacagcagtggaattggaggaagaa
ggatcaagttcttttcaagccactcgaagaggttgcatgcccaaagcatatgcagaatac
atgcaaacactgaatgagatgcagaaggaggcagcttgtagtgatatttcaaccccctta
atgattgtagctggcccaggaagtggaaagacctcgaccatggtcggccgtgtgttgaca
ttgcttaaagagggaattggtccgacccacattctggccatgacattcactactgctgcc
gcgtctgagatgagggatcgaattggagcagtggcaggaagagcgatcgcaaaggaacta
acaatcagcactttccactcattttgtttgcaactctgccgctcacacgctgagaagctg
ggtcgcacttctgagttcctaatatatgggcacgggcagcagagacgagcgataattgag
gccgtgcgcttgatggagaatgcaaggaagactggaccaaattgtggtgccagtgaactt
gaggaagactctagtggtatatctggcaatgcacagtctttcaaagacaagtcaaagaag
tggcacaagtttgtgacccaggctaaagcttctggaaagacccctatggaatgtcgaaca
atgggagatgagataggagctgcaattcttgggaactacaatgatattttaagatcctgt
aatgctctggattaccatgatttcatcagctcttcagtaaagctactaaatgattttcct
gaagtgtacaaggagtgtcaggacacatggaaagccatagtagtagacgagtttcaggat
acaagtgccatgcagtatggtcttttacgtttacttgcagctcataattgcataactgtt
gttggtgatgaagatcagtccattttcagtttcaacggggctgacatttgtggctttgat
tcattccgtagagattttccagcccacaaagagattaggctaactaaaaattatcgttca
acacgctgtattgttgaggccgcttcatctcttatccaccataatgtaaaacgatgccag
ctcaagcaagttgtaactgataattcctctgattgcaaaattactgtcaaggaatgccac
aacgaggatgcgcaatgtgcattcgttgttgataaaatcttagaactcacgtccgctagc
ttggacactaagtgttcctttggtaacattgcaattctttatcgacgacaggtatcaggg
agagcattccagacatccttccgcagtaggaagataccttttaacgttcatggtgtggcc
ttctaccggaaaaaggtaatcaaagccattatggcaatgcttagaacagcattgcctggt
tgtgatgatgggccatttcgtcaggtgttcaaggtgttattacctggcgagaaggaagaa
aagaagagggttattgactatattgacaaaatagccactacaaggaaatgcagctttgta
tcagctgcctgtgacatctttggtgcaaagatttcgggtaccttcaaaaggagtcaactt
acccaaggacgcaaggtgttatttacgctagatatgatatcaaaactcattcaaagagag
caatcaatttcagcagtcataacgtcggtggtaaatgtgttacctcagaaataccttctt
gaacaacgtgcagttgttgatgtagaaggtggaaaactgttaaatgaagagaatgacctg
agatcggtccttcaatacctattggatgatgtgtctgatttcttgtctacacatttcggt
aatgcagaagtgggaagagaatgtacaacaaaagagaaaggctgtggtaatgtacttaag
gcttttattgactatatatcttcaagagaggttgaaaattttcggactaggaggcgcgac
aatgagaattctgttacactgactacaatccatcagtcaaaaggtctagaatgggatgca
gtgttcattgtgaaggcaaatgattctgaaattcctttattgcatgaatttaacggtgtt
gtgaaagaaggcggaactactcttgaggaggagcgtcggctgctgtatgttgcaatgact
cgtgctcggaagaagttgtacattttgtatgttattatggattccaattggcagttgcta
caaccctcacgtttcttgaaagaaatcccagaccacctccttgaagtccaggctgagctg
actaggaaaggattgcaagcaaaggctgaggacctttcaaagagaattgtgctatctact
actgatgtaccgaaacatgaaccatcacctagggcacattgtcccattattcaaagtgat
ggtattgtttctaatgactcgccagaactcacagatgcatgcaatgggaacagctttttg
aggaggttcaacatagaggaccgatcaactgtttcccatttattccatcagtgggcaaag
aaacaagcatttcaagaccctaagcgattgcttgataaggttggtttcgtaattgatgaa
cggatgagagtgaagacaaacaaaaacaaggatgttttacgtgcgctgaagtcgttcttg
aagtgtgatgatgcctttcactatgcacaatacgtgttgaggtgggagcaaattcctgct
gaccaacgtgctcatttagtaaaagagaaacaggaatatttccagaagcaaagaattgag
aactctatgggttcatcagcagctacatccaaacagattgcttatcttcagaacctggga
tgcacaatcgtgcccacatcacgtcttcatgcatcccgtttgattgagcagtacaaatcg
ctctga
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