Magnolia sinica: 131248140
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Entry
131248140 CDS
T09699
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease JHS1 isoform X1
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
msin
Magnolia sinica
Pathway
msin03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131248140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msin03032
]
131248140
Enzymes [BR:
msin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
131248140
DNA replication proteins [BR:
msin03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
131248140
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
131248140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
AAA_30
AAA_19
UvrD-helicase
nSTAND3
Cas_Cas4
Dna2_Rift
ResIII
SLFN-g3_helicase
AAA_16
AAA_29
Motif
Other DBs
NCBI-GeneID:
131248140
NCBI-ProteinID:
XP_058104198
LinkDB
All DBs
Position
6:7575946..7617936
Genome browser
AA seq
1341 aa
AA seq
DB search
MAPRKKSSSSSKKSNQIHQSQPSKFGIQHFFDRHTQSAATSTPPHPPPNPPEIPNSQCPN
PLNLTPNTNPADPPKTTSNAEENLSEISPDVSKSVSFKRFKFSPGMLIKQTQDDGGEEVT
WKISPVNERLRSVTKNLPEMMRVLSDASKLNTLHPCSQKQSSPCSSGKLEKWLSSPTLKA
PERSSSFTKRVSFEAFDQEKQTEVCNGLGSRADPNINSIVNTQSPFRTPPSMSYCPAESN
VGVVCNGESDHSDSRQHRKALLELLDQVEDVIAVEEPVFNHAREYLLDDQDKMSHEMSVG
TDPLEKALIIPSERVCHGHSSVTFLVLEVSEKCRGPDPSCAQNPFKVLRLLNEHSGEERI
LHLYDEWFYSLIGPGDTLNVIGEFDDQGKCIVDRDDNLVIIHPDILVSGTRVAASFTCPR
RTVLDERLKCSEHSTAALIGTLLHQIFQAGLLHEFPTRDFLEEYARIVLQKNIESLYACG
VNENDIHAKLFEAIPRILNWLTCLRNPKEPRISTVDFGSIDGQKEVRITEVIDIEEMAWA
PRYGLKGMIDASIRVRIDSDVDGSNEKVIPLEFKTGKGTSGQSAMEHCAQVILYTLLMSE
RYLKDINFGLLYYLHTDQTRGIPVRRSDVVGLIMRRNELATDILKASTTQLLPPMLRNPN
TCKGCRHLNVCTVYHKVHGGNAESSGLDGVFESYIEHLTSAHFDFLRQWDRLIDLEAKET
QVAKREMWRSSGLRRGQNTNSLFSMILDVSNESLPETSSKDGRFFYRLVRQESPPYNSEM
QSEDKLNAAPPIISNLDCTLKRGDHVILSTESGRVAVANGVIADIDRFHVSVSLSRKLRL
PGSSPSSEKEDLMQEVWQIDKDEFASSYAIMRFNLTQLFVQSARSSHLRRMIVDLEAPRF
DSGGIFSQDPAISYVRSEKNMNDDQRRAIHKILTAKDYALILGMPGTGKTSTMVHAVKAL
LMRGASILLTSYTNSAIDNLLIKLKGQGIDFVRLGRDEAVHDEVRGNCFSATKTHSLEEI
KLRINQVSVVGVTCLGINHPLLAHKKFDICIMDEAGQTTLPVSLGPLMFASTFVLVGDHY
QLPPLVQSTEARENGMGISLFCRLSEAHPQAISALQCQYRMCAGIMELSNALIYGNRLRC
GSGKIANAKLEFSSAKHIMSWLKEVLDHNKSVAFISTDMLPALEKKEHKAVNNPTEAYIV
KEVTEELLNRGILGDEIGIITPYNSQANLIRRVVGTPSVEIHTIDKYQGRDKDCILVSFV
RSSENLRASHSTLLGDWHRINVAITRAKKKLIMVGSCKTLSKVPLLKLLIKKVAEQSGIV
NVSKADIHYLGELKKCSQVSV
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atggctccaaggaagaaatcctcctcttcatccaagaaatcaaaccaaatccaccagtcc
cagccttccaagttcggaatccagcatttcttcgatcgtcacacccaatccgctgctact
tcgactcctcctcatcctcctccaaatcccccagaaatcccgaattcccaatgtcccaat
cccctaaaccttactccaaacacgaatcccgcagatccaccgaaaaccacctccaatgcc
gaagagaatctgtctgagatctcaccggatgtctccaaatcagtatctttcaagcgcttc
aagttctcacctggaatgttgataaagcagacacaagatgatggaggcgaggaggtcacg
tggaagatttctccggtgaatgaacggcttcgatccgtcactaagaatttgccagaaatg
atgagagtgttgtcggatgcttcgaagctgaatacacttcacccatgttcgcaaaaacag
agttctccttgttcatctggaaagcttgagaaatggctttcttctccaacactaaaggcc
cctgaaagatcctcatccttcacaaagagggtatcttttgaagcatttgatcaggaaaag
cagacagaggtttgtaatggtcttggaagcagggctgacccaaacatcaatagcatcgta
aacacgcagagtccatttagaactcccccatctatgtcgtattgtcctgctgagtccaat
gtcggtgttgtctgtaatggagaatctgatcattcagattcacgacagcacagaaaggca
ttgcttgaacttttagatcaagtggaagatgtcattgctgttgaagaaccagtatttaat
cacgcaagggaatatttattggatgatcaggataagatgtctcatgagatgtctgtggga
actgatcctctggagaaagcattaatcattccgtcagaaagggtttgtcatggtcattcc
agtgtaacttttcttgtattggaggtttctgagaagtgcagaggtccagatccatcatgt
gcccaaaacccttttaaggtccttcggttattgaatgaacacagtggagaagagcggatt
ttgcacttgtatgatgaatggttttacagtctcattggacctggagatactttaaatgtg
attggagaatttgatgaccagggaaaatgcattgtggaccgtgatgacaatcttgtcatc
attcatccggacatacttgtgtctggaacacgggttgctgctagtttcacatgcccaaga
cgcaccgtccttgatgagaggctcaagtgtagtgagcattcaactgcagcattaattggt
accttgcttcatcaaatttttcaggctggtctacttcacgagtttccaacaagagatttc
ttggaagaatatgcaagaatagtgcttcagaaaaatattgagagcttgtatgcatgcgga
gtgaatgagaatgatatacatgcgaaactatttgaggcgattcctagaatattaaattgg
ctcacttgtcttaggaatccaaaggaaccaagaatcagtactgttgattttggatctatt
gatgggcagaaagaggtcagaataactgaggttatagatattgaggagatggcatgggct
ccaagatatggactgaaaggaatgattgatgcttctatccgtgtaaggatagattctgat
gttgatggatctaatgagaaagtcatccctttggagtttaaaactggaaaaggaaccagt
ggtcagtctgctatggaacactgtgcccaggtgatcttatacactcttctaatgtctgaa
agatatttgaaggatatcaactttggtcttctatattatctccatacagatcagacgcgg
gggattccagttagaagatctgatgttgttggactaatcatgcgccgtaatgaactcgca
actgatattcttaaggcatctacgacacagcttctgcctccaatgttacgaaatccaaac
acgtgcaaaggctgtcgccacctcaatgtctgcactgtctatcataaggtgcatggaggc
aacgctgagagtagtggactcgatggtgtgtttgagtcatacattgaacacttaaccagt
gctcactttgatttccttcgacaatgggatcgattaattgatttggaggccaaagagaca
caggttgcaaagagagaaatgtggcgttcatctggtttaaggagagggcagaacaccaac
agcctcttttccatgattcttgatgtttcaaatgaatccttacctgaaacatcatctaaa
gatggccgtttcttttatcgtcttgtgcgtcaagagtcacctccctacaattcagagatg
caaagtgaagacaaactgaatgctgccccacctataattagcaacttggattgcaccctc
aagcgtggcgatcatgtgatacttagcacagaatctgggcgtgtagcagttgcaaatgga
gtcatagctgacattgaccgttttcatgtttcagtctccttgtctcgaaagctaaggctt
ccagggagcagcccttcttccgagaaagaagatctcatgcaggaagtttggcagattgac
aaggatgaatttgcttcctcctatgcaatcatgagattcaacctcactcaactgtttgta
caaagtgcgcgaagttctcatctcaggaggatgattgttgacctagaggcaccgaggttt
gatagtggaggcatattcagtcaggacccagcaatatcatatgttcggtcagagaagaat
atgaatgatgatcagcgaagagctattcacaagatacttacagcgaaggattatgctctt
attctaggaatgcctggaacaggcaagacatccaccatggtgcatgctgtgaaggcatta
ttgatgcgaggtgcttccattttgcttacgtcctacacaaattcagctattgataatttg
cttatcaagctgaagggtcagggcatagattttgtacgtcttggaagagatgaagcagtg
catgatgaagttcgtggaaattgtttttcagcaacaaaaacacatagtttggaggaaatt
aaactgagaatcaaccaagtcagtgtcgttggtgttacctgcttggggataaaccatccc
ttgcttgcacacaagaagtttgacatatgtataatggatgaagctggacagacaaccctg
cctgtatctttagggccattgatgtttgcttcgacatttgttcttgttggagaccattac
cagctacccccacttgttcaaagcacagaggcccgggaaaatgggatggggattagcttg
ttttgcaggctttccgaagctcatcctcaggcaatttcagctttgcaatgccagtatcgc
atgtgtgctggtattatggaactatcaaatgccctgatatacggaaacagattgcgttgt
ggttcaggcaaaatagcaaatgccaagcttgagttttcaagtgcaaagcatattatgtca
tggctaaaggaggtcctggatcacaacaagtcagttgcatttatcagcacagatatgctg
cctgctttagaaaaaaaggaacataaggctgtaaacaacccaactgaagcgtacattgtc
aaagaggttactgaggagctgttaaacagaggcattcttggggatgagatcggcatcatt
accccctacaactcacaggcaaatctcatccggcgtgttgttggcacaccatccgtggag
atacacaccattgacaaataccagggaagggataaagactgcatattagtgtcctttgta
agatccagtgaaaatttacgggcttctcattctactctgcttggggactggcataggatc
aatgtggctataactcgtgcaaagaagaagttgatcatggtcggatcatgcaaaaccctt
tcaaaggtcccattgctaaagcttctgatcaagaaggttgccgagcagtctggcattgtg
aatgtctcaaaggcagatatccattaccttggagagttgaagaaatgctctcaggtgagt
gtataa
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