Magnolia sinica: 131248435
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Entry
131248435 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131248435 isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131248435
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
msin04812
]
131248435
Enzymes [BR:
msin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
131248435
Membrane trafficking [BR:
msin04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
131248435
Cytoskeleton proteins [BR:
msin04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
131248435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_22
AAA_16
AAA_14
Vps4_C
NPHP3_N
AAA_2
TIP49
Mg_chelatase
MIT
DUF815
AAA_25
FliT
nSTAND3
IstB_IS21
RNA_helicase
AAA_24
nSTAND_NTPase5
NACHT
MCM
Motif
Other DBs
NCBI-GeneID:
131248435
NCBI-ProteinID:
XP_058104696
LinkDB
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Position
6:complement(17694804..17727454)
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AA seq
494 aa
AA seq
DB search
MSYFKGLVDSLSDFFSGIDPSNEPTPSATSTAHVRSHDHTMDSVIGPSISNERIAHKLKG
YFDLAKEQIDKAVRAEEWGLIDDAVAHYKNAERVLLEASSTRVPSLVSSSEQEKVKSYHH
KILKWQGQVSERLQVLSKRAAGTSSSKTTLNHSQTGRVAPAVPRTQKGILQRPPSSKGNN
SMARNTPNNIGNPKSTQEAGYDAKLVEMINTVIVDRSPSVKWEDVAGLDKAKQSLLEMVI
LPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVTASSLTSKWVGEA
EKLVRTLFMVAVSRQPSVIFIDEIDSIMSTRLANESDASRRLKSEFLIQFDGVTSNPNDL
VIVLGATNKPQELDDAVLRRLVKRIYVPLPDENIRRLLFKHQLKGQAFSLPGSDLERLVK
ETEGYSGSDLQALCEEAAMMPIRELGSNILTIKANQVRPLRYGDFQKAMTVIRPSIVKSK
WEELEQWNKEFGSN
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagctacttcaagggcctcgttgattctctcagcgattttttctctggtatagaccct
agcaacgaacctaccccgtcggctacttccaccgcccacgtccgatctcacgatcacacg
atggacagcgtcatcggaccgtccatctccaacgaaaggatcgcacataagctcaaggga
tacttcgatctagcgaaggaacagatcgataaagccgtccgggctgaagaatggggtctg
atcgatgatgcggtggcccactacaagaacgctgagcgtgtgttgcttgaagccagttca
accagagtcccttccctcgtttcctccagcgaacaggagaaggtcaagtcttatcatcat
aagattttgaaatggcaagggcaagtttcagagagactacaagtattaagtaaacgggcg
gctggcacatcatcaagcaagaccaccttaaaccattcacaaactggaagagtcgcgcct
gcagtgcctagaactcaaaagggtatattacaaagaccgcctagttccaaaggaaacaat
tccatggcaaggaacactccaaataatattggaaacccaaaatcaactcaagaagctggt
tatgatgctaagttggttgaaatgataaataccgtgattgtggacagaagtccctctgtt
aaatgggaagatgttgctggtcttgataaggcaaagcaaagtctgttggaaatggttatc
ctaccaactaaaagaagagacctatttactggccttcggaggccagctagaggattgctt
ctctttggtccacctggtaatgggaagacgatgcttgccaaagctgttgcttcagagtca
gaagcaacattttttaacgtgactgcctcttctttaacatcaaaatgggtgggtgaggct
gaaaagctggtgcgaactcttttcatggttgctgtttccaggcagccgtcagtaattttc
attgacgaaattgacagtataatgtctacaaggttggctaacgagagtgatgcaagcaga
agattgaaatcagagttcttaatccagtttgatggggtgacctctaatccaaatgatctt
gtaattgtccttggtgccactaataagccacaagagctggatgatgcagttcttcggaga
ttggtgaagagaatatatgtacctctaccagatgaaaacattaggaggcttcttttcaaa
catcagctcaaagggcaagcattttcactacctggtagtgatctggaaagacttgtgaaa
gagacagaaggttattctggaagcgatctacaagccttgtgtgaagaagctgccatgatg
ccaatcagagaacttggttcaaacattctcaccatcaaggctaatcaggtgcggccgctg
agatatggagatttccaaaaagcaatgactgtgattagaccaagcatcgtgaaaagcaag
tgggaagagcttgaacaatggaacaaggaatttggctccaattag
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