Magnolia sinica: 131248531
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Entry
131248531 CDS
T09699
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
msin
Magnolia sinica
Pathway
msin03030
DNA replication
msin03410
Base excision repair
msin03420
Nucleotide excision repair
msin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131248531
03410 Base excision repair
131248531
03420 Nucleotide excision repair
131248531
03430 Mismatch repair
131248531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msin03032
]
131248531
03036 Chromosome and associated proteins [BR:
msin03036
]
131248531
03400 DNA repair and recombination proteins [BR:
msin03400
]
131248531
DNA replication proteins [BR:
msin03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
131248531
DNA Replication Termination Factors
ELG1-RFC complex
131248531
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
131248531
DNA repair and recombination proteins [BR:
msin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
131248531
Check point factors
HRAD17(Rad24)-RFC complex
131248531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
AAA_16
Mg_chelatase
Rad17
Viral_helicase1
RCF1-5-like_lid
AAA_24
AAA_11
RuvB_N
AAA_5
nSTAND3
AAA_19
AAA_assoc_2
AAA_25
AAA_28
DNAX_ATPase_lid
AAA_18
AAA_30
AAA_3
ABC_tran
RNA_helicase
MeaB
IstB_IS21
NTPase_1
DNA_pol3_gamma3
bpMoxR
AAA_7
Motif
Other DBs
NCBI-GeneID:
131248531
NCBI-ProteinID:
XP_058104834
LinkDB
All DBs
Position
6:complement(22434629..22443865)
Genome browser
AA seq
335 aa
AA seq
DB search
MASSGPPQSSSSSGYEIPWVEKYRPAKVADVVGNVDAVSRLQVIARDGNMPNLILAGPPG
TGKTTSILALAHELLGSYCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVII
LDEADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEIL
ARLMVVVEAEKVAYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPH
PLHVKNMVRNVLEGNFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKE
TGFAHMRICDGVGSLLQLCGLLAKLSLVRETAKAA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcgggcccaccacagtcatcatcatcgagcggctacgaaatcccgtgggtg
gagaaatacagacccgccaaagtagccgacgttgtggggaacgtggacgccgtctctaga
cttcaagtcattgcaagggatggaaacatgcccaacctcatcctagccggccctccggga
actgggaaaactacaagtatacttgcccttgcgcatgagctcttggggtcatactgcaag
gaggctgttttggagttaaatgcatcagatgacaggggaattgacgttgtgaggaacaag
attaagatgtttgctcagaaaaaggtaacactcccaccagggcggcacaaagtaataatt
ttggatgaagccgacagcatgacatctggagcacaacaagccttgaggaggacaatggag
atatattcaaactcaacacgatttgctctcgcgtgcaatacttcttcaaaaattattgag
cccattcagagcagatgtgcacttgttcgtttttcaagattgtccgaccaagagattctt
gctcgtcttatggtagtggtcgaagctgagaaggttgcatatgtgccagaaggtcttgaa
gccataatcttcactgctgatggggatatgaggcaggctttgaataacttgcaagctaca
tatagcgggttccggtttgtcaatcaagagaatgtcttcaaggtctgcgaccagcctcac
cctttacatgtcaagaatatggtccgcaatgttctcgaggggaattttgatgatgcctgt
tctggtctgaagcagctctatgatttgggttattctcctaccgacataatcaccacgctt
ttccgtatcataaagaattatgatatggccgaatatctgaaattggagttcttgaaggaa
actggatttgcccacatgagaatctgcgacggagttggctcactccttcagctgtgtggc
ctcttggccaagctctctctagttcgggaaacagcaaaagctgcgtaa
DBGET
integrated database retrieval system