KEGG   Magnolia sinica: 131248531
Entry
131248531         CDS       T09699                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
msin  Magnolia sinica
Pathway
msin03030  DNA replication
msin03410  Base excision repair
msin03420  Nucleotide excision repair
msin03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:msin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    131248531
   03410 Base excision repair
    131248531
   03420 Nucleotide excision repair
    131248531
   03430 Mismatch repair
    131248531
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msin03032]
    131248531
   03036 Chromosome and associated proteins [BR:msin03036]
    131248531
   03400 DNA repair and recombination proteins [BR:msin03400]
    131248531
DNA replication proteins [BR:msin03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    131248531
  DNA Replication Termination Factors
   ELG1-RFC complex
    131248531
Chromosome and associated proteins [BR:msin03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    131248531
DNA repair and recombination proteins [BR:msin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     131248531
  Check point factors
   HRAD17(Rad24)-RFC complex
    131248531
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 AAA_16 Mg_chelatase Rad17 Viral_helicase1 RCF1-5-like_lid AAA_24 AAA_11 RuvB_N AAA_5 nSTAND3 AAA_19 AAA_assoc_2 AAA_25 AAA_28 DNAX_ATPase_lid AAA_18 AAA_30 AAA_3 ABC_tran RNA_helicase MeaB IstB_IS21 NTPase_1 DNA_pol3_gamma3 bpMoxR AAA_7
Other DBs
NCBI-GeneID: 131248531
NCBI-ProteinID: XP_058104834
LinkDB
Position
6:complement(22434629..22443865)
AA seq 335 aa
MASSGPPQSSSSSGYEIPWVEKYRPAKVADVVGNVDAVSRLQVIARDGNMPNLILAGPPG
TGKTTSILALAHELLGSYCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVII
LDEADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEIL
ARLMVVVEAEKVAYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPH
PLHVKNMVRNVLEGNFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFLKE
TGFAHMRICDGVGSLLQLCGLLAKLSLVRETAKAA
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggcttcttcgggcccaccacagtcatcatcatcgagcggctacgaaatcccgtgggtg
gagaaatacagacccgccaaagtagccgacgttgtggggaacgtggacgccgtctctaga
cttcaagtcattgcaagggatggaaacatgcccaacctcatcctagccggccctccggga
actgggaaaactacaagtatacttgcccttgcgcatgagctcttggggtcatactgcaag
gaggctgttttggagttaaatgcatcagatgacaggggaattgacgttgtgaggaacaag
attaagatgtttgctcagaaaaaggtaacactcccaccagggcggcacaaagtaataatt
ttggatgaagccgacagcatgacatctggagcacaacaagccttgaggaggacaatggag
atatattcaaactcaacacgatttgctctcgcgtgcaatacttcttcaaaaattattgag
cccattcagagcagatgtgcacttgttcgtttttcaagattgtccgaccaagagattctt
gctcgtcttatggtagtggtcgaagctgagaaggttgcatatgtgccagaaggtcttgaa
gccataatcttcactgctgatggggatatgaggcaggctttgaataacttgcaagctaca
tatagcgggttccggtttgtcaatcaagagaatgtcttcaaggtctgcgaccagcctcac
cctttacatgtcaagaatatggtccgcaatgttctcgaggggaattttgatgatgcctgt
tctggtctgaagcagctctatgatttgggttattctcctaccgacataatcaccacgctt
ttccgtatcataaagaattatgatatggccgaatatctgaaattggagttcttgaaggaa
actggatttgcccacatgagaatctgcgacggagttggctcactccttcagctgtgtggc
ctcttggccaagctctctctagttcgggaaacagcaaaagctgcgtaa

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