Magnolia sinica: 131248648
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Entry
131248648 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131248648 isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
msin
Magnolia sinica
Pathway
msin04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
131248648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131248648
Membrane trafficking [BR:
msin04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
131248648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
VPS8_N
TPR_Vps41
TPR_VPS8_2
Clathrin
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
WDR55
WD40
zf_RING_Vps8
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
zf-RING_2
WD40_Prp19
zf-RING_Vps41
Beta-prop_HPS5
CDC13_N
Y1_Tnp
C2orf69
Beta-prop_LRRK2
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
131248648
NCBI-ProteinID:
XP_058105005
LinkDB
All DBs
Position
6:35822821..35891853
Genome browser
AA seq
1990 aa
AA seq
DB search
MTKKLSKSPMEFDLDSFLQFHTTTTDSDSDDAPNSIHRRTVDEILNDSSSSSSSSPSSSP
VRQHLPVLSPNPLPQEKIQIPETPLPIPPIPAVDQTLKPPHPDEAPSEPKITSSFSRRKS
GEFSSTSFSLGRNNSLPLPLLFGGIKPNPKPGAALAAAAAASRSVPTPHATAIKFRRAKI
ALLRQGSADSVGDSETGLDDSGGFERLELAPSDDVLAADGSESTRLDGKSGEEDDHAENS
VSSKTESNLAEAVEILHSDDELQAVQEAEIEQREDLRADEDSLDSNPSPENEIHTVSNST
EVVGEMRVPTSPRSNNAAGVDENSTFFYSTEVIEEHVLSSPQDEKASQTEEDSTFPRSEK
HAIDTNTSSDHKDEEDTNLRSDVTELVEDISVQLESKRASKKSSKKLRSSMKPLELAEEL
EKKHASFGLHWEEGAAAQPMRLEGIRRGPPAVGYLQIDPYNAITRMISSQAFKRDHGSPQ
VLAVHMNFIAVGMSKGVVLIVPSKYSAHYADNMDAKMSVLGSQGEKSHSAVTSMCFNQQG
DLLLVGYGDGHLTVWDVHRAAAVKTITGEHSAPVVHTLFLGQDSQVTRQFKAVTGDSKGL
VLLHAFSVVPLLNRVSIKTQCLLDGQRTGIVLSASALLFDDSHGGGFTSAQGNPTASPSG
LGSMVGGVVGGVVGGEAGWKLFSEGASLVEEGVVIFVTQQTALVVRLAPSLEVYAQLSKP
DGIREGSMPYTAWKFVTHSRGSSTENMPTEASERASLLAIAWDRKVQVAKLVKSELKVYK
EWSLDSAAIGVAWLDDRMLVVLTVRGQLFLFAKEGTELHRTSFVIDSSGGDDIITYHTHF
TNSFGNPEKAYHNSVAVRGATIYILGPMHLVVSRLLPWKERIQVLQKAGDWMGALDMAMR
LYDGHAHGVIDLPRTVDAIREAIMPYLVELLLSYVDEVFSYISVAFCNQVGKVEQADEPK
VSSSVQVQIQEQYARVGGVAVEFCVHIKRTDILFDEIFSKFVAVQQGGTFLELLEPYILK
DMLGCLPPEIMQALVEHYSSKGWLQRVEQCVLHMDISSLDFNQVVRLCQEHGLYGALIYL
FNRGLDDFKAPLEELLMVVQNNQRTNATAIGYRMLVYLKYCFLGLAFPPGHGSIHPSRLP
LLRTELLQFLLENSNAQGSQAVTRFKSSAGACPNICYLLWLDTEATLDVLRCAFLDVEPL
KSGHPADDSVDANIKENNEPDLSNAENQNLMVQNTVNTLIHILEMEIPEVDKFTGMDDNG
SQEAWPSKKDIGHLLEFIACFVACKGATISKTVLNHILVYLTSEIDLSSTVSSPKTETAQ
RKEKQVLALLKVVPETDWDSSYLLDLCEKVQFYQVCGFIHTIRGQYLAALDSYVKDVDEP
VHAFVFINSMLLQLRENEFSAFQSAVISRIPDLVVLSREGAVFLVIDHFSKESHHILSEL
HFHPKSLFLFLKAVIEVHLSGTLNFSSLERARVLDFPCGRKNKDQSNELEAYMERVSNFP
KLLRHNSIHVTDEMAELYLELLCQYERCSVLKFLETFENYRLEHCLRLCQEYGVTDAAAF
LLERVGDVGSALLLIMSDLSEKLHLLDTALEAKVPEITSGSLTEMEQLNAILRMKEVDTV
RDILHASIGLCQRNTPRLDLQEYESLWFRLLDSFCEPLRDLYKDKKISKGRNYAGALPAA
VGIQEDTEASMYRWKISKFDKGAHILQRVFSQFIKEIVEGMVGYVSLPTIMAKLLSDNGS
QEFGDFKLTILGMLGTYGYERRILDTAKSLIEDDTYYTMSLLKKGASHAYAPQNFTCCIC
SGSLTKESSTSSIRVFNCGHATHLHCEYQENEASNRDNPAGCPICMPKKKKSRARNKSVL
VENGLVNNYLSRPQSAQGKTTAQHIHESDAVEKPYGLQQMSRFEILSNLGKPQGSLQIET
LPPLRLTPPAIYHEKVKKGSDLSTGESSKMPVKSEKTSKIRQLKELKTKGSSSIRFPLKS
SIFSTENRRR
NT seq
5973 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaagctctcaaaatctccgatggagttcgatctcgattccttcctccaattc
cacaccaccacaaccgactccgactccgacgacgcacctaactccatccatcgccgtacg
gtcgacgaaattctcaacgactcctcctcatcctcctcttcctctccatccagcagtccc
gtccgtcagcacctccccgtcctctctccaaaccctctcccccaagaaaagatccaaatt
cccgaaacgccccttcccatccctccaatcccagccgttgatcaaaccctcaaaccgccc
caccccgacgaagcaccatctgagccgaagatcacctcctccttcagccgcaggaaatca
ggcgaattctccagcacttctttctccttaggacggaacaattcccttcctctgcccctg
ctgttcggaggcattaagccgaaccctaagcccggggcagcacttgctgcagcggccgca
gcttcccgttccgttcccacccctcatgccaccgctatcaagttcagaagagcaaagata
gccctgcttcgtcagggatctgctgattcggtcggcgactcggagacaggattggatgac
agtggaggttttgagcggttggaattagctccttctgatgatgttctggccgcagatgga
tctgaaagcactcggttagatgggaaatcaggagaggaagatgatcatgccgaaaattct
gtctcttcaaaaaccgaatcgaatttggcagaggcagtggagattttgcacagtgacgat
gaacttcaagctgttcaagaggcagagatcgaacaaagagaagatcttcgagcagatgaa
gattcattggattccaatccttcccctgagaatgagattcatacggtttcaaattcgact
gaagttgttggtgaaatgcgtgtccctacttcgcctcgaagcaacaatgctgctggtgtg
gatgagaattctacatttttttattctactgaggtcatcgaagagcatgtcctgtcttcc
cctcaagatgagaaagcttcgcagactgaagaagattctacatttccaagatctgaaaaa
catgctattgatacaaacacgtcatctgatcacaaagatgaagaagataccaatttgaga
agcgacgtgactgagcttgttgaggacatttcagttcaattggagagtaagagagcgagt
aaaaagagtagcaagaaattgagatcgtctatgaagccgttggaattggccgaagagctc
gagaagaaacatgcctctttcggtttgcactgggaggaaggtgctgcagcccagccgatg
aggcttgagggcattcgaaggggtccgcctgcagttgggtatttacagattgatccctac
aatgcaatcactcgcatgatttcatctcaagcgttcaagcgcgatcatgggtccccacaa
gtcctggcggttcatatgaacttcattgctgtgggaatgtcgaaaggagttgttcttatt
gtgcctagtaaatattccgctcattatgctgacaatatggatgcaaagatgtcagtgctt
gggtcccagggtgaaaaatctcattcggcagtgacttccatgtgcttcaatcagcagggg
gacctgcttttagtaggatatggtgatggtcatctgacggtttgggatgttcatagagct
gcagctgttaaaacaattactggggaacattctgcaccggtagtacatacattattttta
gggcaagattcccaagttacacgtcagtttaaagcagtgactggtgattctaaagggctc
gttttattacatgctttttcagtggtgcccttgctcaatcgtgtttccatcaaaacacag
tgtcttcttgatggtcaaagaactggaattgtattatcggcatctgctcttctgtttgat
gactcccatgggggtggttttacatctgcccaaggcaatcctacagcctcccccagtggt
cttgggagcatggtggggggtgttgttggaggtgtagttgggggagaggcaggatggaag
ctcttcagtgaaggtgcttcattggttgaagaaggtgtggtcatatttgtcacccagcaa
actgctctggtggtaaggcttgctcccagtttggaagtctatgcgcagctttctaagcca
gatgggatccgggagggttccatgccttacactgcatggaaatttgtgacacactcacga
ggttcctctactgaaaatatgcctacagaggcatcagagagagcttcattgcttgcgatc
gcatgggacagaaaagttcaagtagcaaagttggttaaatcagagctgaaagtatataaa
gaatggtccctagatagtgcagcaataggcgtggcatggttggatgatcggatgttggtg
gttctcacagtgcgaggacaactctttttgtttgcaaaggaaggaactgagcttcaccgg
acaagttttgtcatagatagttctggaggagatgatatcatcacgtaccatactcacttc
actaatagctttgggaatcccgaaaaggcttatcacaattctgtagctgtaaggggagcc
actatatatatactagggcctatgcatcttgtagtttctcgtcttctcccatggaaggaa
cggattcaggttttgcagaaggcaggtgactggatgggtgctctcgacatggcaatgagg
ctctatgatggtcatgctcatggtgttatcgatctaccgagaactgttgatgctatacgc
gaggccataatgccatatttggtggagttgcttttatcgtatgtagatgaagtattttct
tatatttcagtggcattctgcaaccaagttggaaaagttgaacaagcagatgagccgaaa
gtcagcagttctgtgcaagtccagattcaagagcaatatgcccgcgttggtggtgttgca
gtagaattttgtgtccatattaaaaggactgacatcctgtttgatgaaattttctccaaa
tttgttgctgttcaacaaggaggcacattcttggagcttttggagccatatattttaaag
gacatgcttggatgtctacctcctgagattatgcaagcactggtagagcattatagtagc
aagggatggttgcagcgagttgaacagtgtgttcttcacatggacatttcttccttggat
ttcaatcaggtggtcaggctatgccaagagcacggattgtacggcgccctgatatatctt
tttaatagaggtttggatgatttcaaagcacctttggaggagcttttgatggtggtacag
aataaccaaaggacgaatgccactgctattggatacaggatgcttgtttatctgaagtat
tgctttctagggcttgcgtttcctccaggacatggttctattcatccttctcgcttgcca
ttacttagaactgaactgctgcagtttctgctggagaatagtaatgctcaaggttcgcaa
gctgtaaccaggttcaagtcatctgctggagcctgcccgaacatatgttatctattgtgg
ttggatacagaagcaactcttgatgttttgagatgtgctttccttgatgtggaaccttta
aaatcaggccaccctgcggatgattcagttgatgcaaatataaaggaaaacaatgaacct
gatttaagtaatgcagaaaatcaaaatttgatggtgcaaaatacagtaaacaccctaatt
catattcttgaaatggagatccctgaagttgacaaattcactggcatggatgataatgga
tctcaagaagcatggccttcaaaaaaagacattggtcatctgcttgagttcattgcttgc
ttcgttgcatgtaaaggtgctactatttcgaaaactgtattgaatcatattctggtgtac
ttgacatcagaaattgatctctcatcaactgtttccagtccaaaaactgaaactgctcag
agaaaagagaaacaggtgcttgccctattgaaagtggtgcctgaaacagactgggattct
tcgtatctgttagatctctgcgaaaaggtccaattttatcaagtttgtggcttcatacat
acaatcagaggccagtatcttgctgctttggatagctatgtgaaagatgtggatgagccc
gtccatgcttttgtttttatcaatagcatgttgctacagttgagagagaatgagttttct
gcttttcagtcagcagttatttctcgaattcctgacctggtcgtcttaagcagagagggt
gcggtctttttggtcattgaccatttcagtaaggaaagtcatcatattctatctgaactt
cattttcatccaaaaagtctttttctttttctaaaggcggttattgaggttcacttgtct
gggactctcaacttttcttctttggaaagagctcgtgtgttggattttccttgtggaagg
aagaataaggatcagtcaaatgaacttgaggcttacatggaaagggtctccaattttccg
aagcttctgcgtcataattctattcatgtcactgatgaaatggcagaactttatcttgag
ctattgtgtcagtatgaacgttgttcggttctcaagttcttggagacgtttgaaaattat
aggctggagcactgtttacgtctgtgccaggagtatggggtcacagatgcagctgcattt
ttgctagaacgagttggtgatgtcggcagtgctctattacttatcatgtctgatcttagt
gaaaaactacacctgcttgatactgctctggaagccaaagttcctgaaataacttcaggt
agcttaactgagatggagcagcttaacgctattttaaggatgaaggaggttgacactgta
cgtgatatattacatgcttctattgggttatgccagcgaaataccccacgtttagatctg
caggagtatgagtctctctggttccggttacttgattcgttttgtgagcctcttagggat
ctatataaagataaaaaaatctctaaaggaagaaattatgctggtgcactacctgcagca
gttggtattcaggaggacacagaagcatctatgtatagatggaagatctcaaaatttgac
aaaggtgctcatattttacaaagggtgttttctcagttcatcaaagaaattgtggaagga
atggttggatatgtatcacttccaacaatcatggctaagcttctgtctgataatgggagc
caggagtttggtgattttaaactcacaatattgggaatgctaggaacatatggctatgag
aggagaatcctggacacagctaaatctttaatcgaggatgatacatattatacaatgagc
ttgctcaagaagggggcgtctcatgcgtacgccccacagaattttacatgctgtatatgc
agtggctcccttaccaaagagtcttcaacctcgagcattcgagtattcaattgcggtcat
gcaacccatcttcattgtgaatatcaggaaaatgaagcgtctaaccgggataacccagct
ggctgccctatttgtatgcctaagaagaagaagtcacgtgctaggaacaaatcggtcctt
gtggagaatggattggtaaacaattatttgtcaagacctcaatcagcacaaggaaagact
accgctcagcacatacatgaatccgatgcagtagagaagccatatgggctccagcagatg
tcacggtttgaaatcttgagtaatcttgggaaaccccagggatcccttcagatagaaacc
ttgcctccattgaggctcacaccaccggcaatttaccatgaaaaggttaagaagggatct
gatttatcaacaggagaaagtagcaagatgccagtgaaaagcgaaaaaacaagtaaaatc
aggcagctgaaggagctgaaaacaaagggttcatcctcaattcggttccctttaaagtcg
agcatatttagtactgaaaacagaagacggtga
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