Magnolia sinica: 131248806
Help
Entry
131248806 CDS
T09699
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
msin
Magnolia sinica
Pathway
msin00040
Pentose and glucuronate interconversions
msin01100
Metabolic pathways
Module
msin_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131248806
Enzymes [BR:
msin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
131248806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
131248806
NCBI-ProteinID:
XP_058105256
LinkDB
All DBs
Position
1:complement(121001403..121035709)
Genome browser
AA seq
712 aa
AA seq
DB search
MMIHLYVDDLHCKVTQLAVLLDPFLALVCHLMVKSQIDRDFSQTSQWPQGATLQSPVQTI
YFRLEIFVISVILCIASFGYAGSANIYNVLDSGAVGNGISDDTQALLKAWATACGDGGPN
PSVLIPAGKTFLLKPLAFNGPCKSSSIRFQVLGNLIAPNTIEGWGGAIKWLTFHGVNGLE
INGSGRIGGQGAVWWDQSCKIHPEKALLLDACNDVHVTGITLFDNPRNHISINSCNNVYI
SSVTITAPADSPNTDGIDIERSQYVNIWQSTIGTGDDCIAIGNGGKNVNISWVTCGPGHG
ISIGSLGKDDEFAEVENVQVMHCTFTGTLTGARIKTWQGGSGYARGILFDDMHINNVENP
IIIDQYYCNGYHNCNNQSSAVDISNAKFVGFQGTSSREVAIKLECSKTVGCTDIVLDNVQ
LQPAVPGMKLSSYCINAHGPPCTSCVPQGIFIIFLILSSGCSIMAHLNDDTGTQFNVMDY
GAIGDGETDDSEGCIPQAPTVLSFLHCTHVRLKELRFVDGPNTHILVQNSRRFNISDIYI
SAPQDSPNTDGIHVHASHHVYFDQLVIGTGDDCISIGDRTSDVKISRIGCGPGHGISIGS
LGKDPTSKVSVKNIHVSYANFYGTTNGARIKTWQTDGVKISDVSYRNVYGTSTTDVAINF
MCSETVACTGINVENVQLKSAIGEKQTSSYCLNAYGSSNGIIKPHVPCLTRE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgatgatccacctatatgttgatgacctccattgcaaggtgacccaacttgcagttttg
ttggatccattcctggccctggtgtgccacctgatggtgaaaagccagattgacagggat
ttctcacaaacatctcagtggcctcagggtgcaacgctgcaaagtcctgtgcagacaatc
tactttcgattggagattttcgtcatttcagttatattatgcatcgcttcatttgggtac
gctggttctgctaatatttacaatgttttggattctggagctgttggcaatggcatatct
gatgatactcaagctttactaaaagcgtgggcgacagcgtgtggtgatggtgggcccaat
cccagcgtactaatcccagctgggaagacatttttactgaaacccttggccttcaatggg
ccttgcaagtctagttccatccgttttcaggttcttgggaatctgattgctcccaacaca
attgaaggatggggtggggccattaagtggttgacctttcacggtgtaaatggcctcgaa
atcaacggatctggaagaattggtggtcagggtgccgtctggtgggaccagtcttgcaaa
atacaccctgagaaggcactgctattagatgcatgcaatgacgttcatgttactggcata
acgcttttcgacaacccgaggaatcatatctccatcaacagttgcaacaatgtatacatc
tcttcagttactataacggcccctgcagacagcccaaacactgatggtatagacattgaa
cgctcccaatatgtgaatatttggcaatccaccataggaacaggagatgattgcattgct
attggtaatggtggcaagaacgttaatatcagctgggtgacatgtggaccgggtcatggt
ataagcattggaagcttaggcaaagacgacgaatttgcagaggttgaaaatgtccaagtg
atgcattgtacattcacaggaactttaactggggccaggatcaagacatggcagggaggg
tctgggtacgctcgagggatcctatttgatgatatgcatatcaacaacgttgagaatcca
atcatcattgaccaatactattgtaatggttatcacaactgcaacaatcaaagttcagca
gttgatataagcaacgcgaagttcgttggatttcaagggacatcaagccgggaggtggcc
atcaagctagaatgtagtaagacggtcggctgcaccgatattgttcttgacaatgttcaa
cttcaacctgccgttccaggaatgaagctatcatcttattgcatcaatgcacatgggccc
ccttgcacttcttgcgtgccccaaggaattttcataatttttcttattttaagctcaggt
tgttccataatggcccacttaaatgatgacactgggacccaattcaatgtgatggactac
ggcgcgatcggcgatggcgaaacggatgattccgaaggatgcatcccacaggcaccaacg
gtgctcagcttcttacattgcacccacgtccgtttaaaagaattgagatttgtggacggc
ccaaacactcacatcctcgttcagaattcacgcaggtttaacatttctgacatttacata
agtgcccctcaagatagccctaacacagatggtatccacgtccatgcctcccatcatgtt
tactttgaccagctggttattggaactggtgatgattgcatttctattggagatcggacg
tctgatgttaagattagccgtattggttgtgggcccggccatggtataagtattggaagc
ttagggaaggatcctacatctaaggtatctgtgaagaacattcatgtgagttatgccaac
ttctatggaactaccaatggagcaaggattaaaacatggcagacggatggcgttaaaatc
agtgatgtgagctacaggaatgtatatggaacttcaacaacggatgtcgccattaacttc
atgtgcagcgagactgttgcatgcactggtattaatgtggagaatgtacagctaaaatcc
gccatcggtgaaaagcagacttcgtcttactgtctcaatgcctatggaagtagtaatgga
atcatcaaaccacatgttccgtgcctcacacgtgaatga
DBGET
integrated database retrieval system
