Magnolia sinica: 131248820
Help
Entry
131248820 CDS
T09699
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
msin
Magnolia sinica
Pathway
msin00040
Pentose and glucuronate interconversions
msin01100
Metabolic pathways
Module
msin_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131248820
Enzymes [BR:
msin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
131248820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131248820
NCBI-ProteinID:
XP_058105276
LinkDB
All DBs
Position
1:complement(121163182..121182942)
Genome browser
AA seq
581 aa
AA seq
DB search
MKSPDLGHRCHVGIRGGNGFSEAGETPSSVRRGSDVVKFGWGFPRLAQFNSGYENMGKSH
CLVTEACRLIKFDHIASVSCCREIFVISVIICIASFGCAHSAHIYNVLDFGAVGNGISDD
SQAFLKAWARACGDGGPNPSLRIPAGKTFLLKPVVFNGPCKSTAIGFQVLGNLIAPNTIE
GWGGASNWLTFHGVDGLKIFGSGRIGGQGAVWWSRSCRRHPEKKCTDAPTALLLDACNDL
HVTGITLFDNPRNHISIDGCNSVYISSVTITAPANSPNTDGIDIVHSQYVNIWQSTIGTA
EHMNEVSNIVNQLSVMKMVLDDELQKCTDAPTALLLDACNDLHVTGITLFDNPRNHISID
GCTSVYISSVTITAPANSPNTDGIDIVHSQYVNIWQSTIGTGDDCIAIGNGGKNIKISWV
HCGPGHGISIGSLGQDDGFAAVEQVQVLNCTFTGTSNGARIKTWPGGSGYARRISFEDMH
MNDTDNPIIIDQYYCDGHKCHNQTSASAVDVSDVRFVGFHGTSSKEVAINLECSNTVGCT
DIVLNNVQLTPAVPGMKLSSYCNNAHGPTCTSCVPQVPCLS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcccagatctcgggcacaggtgccatgttggaatacgtgggggaaacggattc
agtgaggcaggagaaacaccaagttcggtgaggcgaggctctgatgtggtgaaatttggt
tggggttttccccgcctcgcccaattcaattccgggtatgagaacatgggaaagtcccat
tgtctagtgacagaagcctgcaggctaatcaaattcgatcatattgcttccgtctcatgc
tgcagggagattttcgtcatttcagttataatatgcatagcttcatttgggtgtgctcac
tcggctcacatttacaatgttttggattttggagctgttggcaatggcatatctgatgat
tcccaagcttttctaaaagcgtgggcgagagcgtgtggtgatggtgggcccaatcccagc
ctacgaatcccagctgggaagacatttctactgaaacccgtggtcttcaatgggccttgc
aagtctactgccatcggttttcaggttcttggaaatctgattgctcctaacactattgag
gggtggggtggggccagtaactggttgacctttcacggtgtagatggcctcaaaattttc
ggatctggaagaattggaggtcagggtgccgtttggtggagcaggtcttgcagaagacac
cctgagaagaaatgcacggacgcaccaacggcactgctattagatgcatgcaatgacctt
catgttaccggcataacgcttttcgacaacccaaggaatcatatctccatcgacggatgc
aacagtgtatacatctcttcagttactataacagcccctgcaaatagcccaaacactgat
ggtatagacatcgtacactcccaatatgtgaatatttggcaatccaccataggaacagcc
gagcacatgaatgaggtcagcaatatagtgaatcagctttctgttatgaagatggtccta
gatgatgaattacagaaatgcacggacgcaccaacggccctgctattagatgcatgcaat
gaccttcatgtcaccggcataacgctttttgacaacccaaggaatcatatctccatcgac
ggatgcaccagtgtatacatctcttcagttactataacagcccctgcaaatagcccaaac
actgatggtatagacattgtacactcccaatatgtgaatatttggcaatccaccatagga
acaggagatgattgcattgctattggtaatggcggcaagaacattaaaatcagctgggtg
cattgtggaccgggccatggtataagcattggaagcttaggacaagacgatggatttgca
gccgttgaacaggtccaagtgttgaattgtacattcacaggaacttcgaatggggccagg
atcaagacatggccgggagggtctgggtacgctcgacggatttcatttgaagacatgcat
atgaacgacacggataatccaatcatcatcgaccaatactattgtgatggtcacaagtgc
cacaatcaaacgtcggcatcggccgttgacgtaagcgacgtacggtttgttggatttcat
gggacgtcgagtaaggaggtggccatcaacctagaatgtagcaacactgtcggctgcacc
gacattgttctcaacaatgttcaacttacacctgctgttccaggaatgaagctatcatcc
tattgcaacaatgcacatgggcccacttgcacttcctgcgtgccccaagttccatgccta
agctaa
DBGET
integrated database retrieval system
