Magnolia sinica: 131248864
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Entry
131248864 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131248864
KO
K12586
exosome complex component RRP43
Organism
msin
Magnolia sinica
Pathway
msin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131248864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131248864
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
131248864
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
ARMET_C
Motif
Other DBs
NCBI-GeneID:
131248864
NCBI-ProteinID:
XP_058105339
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All DBs
Position
6:complement(73043161..73099864)
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AA seq
313 aa
AA seq
DB search
MMSSSGVGDRSSNEKGDEMLSGEMEVDAYRRLFPLRFYERHLLQSVRPDARPLSRARDTT
LALGAVSSADGSALAKIGYTTMLAGIKLEVMTPSLESPDEGCIAIDFHMPPICSPSVRPG
RPAEVAPVISKQLSDAILSSGMINLKELSLISGKAAWMAYLDIYCLDADGSLFDAALLSA
IAAFSHLQIPLVSVNDDGRVVTMSGEQLEGKSVKEPVNKERRKLTLSSIPFALTCILHKK
YILVDPTAEEESIMESLVTVVLDLSGRLVSLYKPGGAVLAYTSTIQDCVALTRQRVKELR
KILDEALSEMEVD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttcttcaggtgttggtgatagaagcagtaatgaaaaaggagacgaaatgctg
tcaggagagatggaggtggatgcctacaggcgactgttccccctccgattctacgagcgc
catctcctccagtccgtacgccccgatgcaaggcccctctcacgtgccagggacaccacc
cttgcccttggggctgtttcatcagcggatggctcggcattggcaaagattggttatact
accatgctggctggtatcaaattggaagtcatgaccccttctttggagtcccctgatgag
ggctgtatagcaatcgatttccacatgcctccaatctgttcgccaagtgttaggcccggc
agaccagctgaggtggcgccagtaatttctaagcaattgtcagatgctattttaagttct
gggatgatcaatttaaaggaactatccttaatcagtggaaaggctgcttggatggcctac
ctggatatatactgtttggatgcagatggttctctttttgatgctgcattgctttcagca
attgctgctttctctcatttgcaaatccctctggtttctgtcaatgacgacggaagagta
gtcaccatgtcaggggaacaacttgaagggaaatcagtgaaggaaccagtcaataaagag
aggaggaagttgaccttgagcagcattccattcgcattgacgtgcatacttcacaagaag
tacatcttggtggatcccacggcagaggaagagtccataatggaatcccttgtgacggtg
gtgctggacttgtcgggtcggcttgtgtccttgtacaaaccaggcggtgcggttcttgct
tacacgtcaaccattcaggactgtgtggcgcttacaaggcagagagtgaaggagctgcgg
aagattcttgatgaagccctatcagaaatggaggtggactag
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