KEGG   Magnolia sinica: 131249080
Entry
131249080         CDS       T09699                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
msin  Magnolia sinica
Pathway
msin03020  RNA polymerase
msin03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:msin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    131249080
  09124 Replication and repair
   03420 Nucleotide excision repair
    131249080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msin03021]
    131249080
   03400 DNA repair and recombination proteins [BR:msin03400]
    131249080
Transcription machinery [BR:msin03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     131249080
  RNA polymerase III system
   RNA polymerase III
     131249080
  RNA polymerase I system
   RNA polymerase I
     131249080
DNA repair and recombination proteins [BR:msin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      131249080
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1 Ribosomal_S4 Mrr_cat
Other DBs
NCBI-GeneID: 131249080
NCBI-ProteinID: XP_058105628
LinkDB
Position
6:complement(92338504..92364022)
AA seq 215 aa
MDGENCICSYVDEGSVESHRYYLARRTVLEMLRDRGYTISDSDISLTLPEFRSIHGQRPD
LERLRISTTLISNPSKKILVIFCGTDVVKLGIVRGILSQVSHDNLSRMILVLQNKMTAQA
RQATKELFPYKVELFQITDLLMNITKHVLKPKHEILTPEEKQKLLSKYNVEEKQLPRILE
ADAVATYYGLEPGQVVKVTYDSEVTGLHVTYRCVM
NT seq 648 nt   +upstreamnt  +downstreamnt
atggatggagagaactgcatctgcagctacgtagacgaaggaagcgtggagagccatcga
tactacctggccagacggacggttctggagatgcttagagacagaggctacaccatctcc
gactccgatatctccctcacattacccgaattccgctccatccacggccagagacccgac
cttgagcgcctccgcatctccactactctcatctccaacccctccaagaagattctggtt
atcttctgtggaactgatgtggtaaaattaggaatcgtgcgcggaatcctctctcaggtc
agccatgacaatttaagcaggatgatattggttctgcaaaacaaaatgacggctcaagct
cggcaggcaaccaaagagttatttccatataaagttgagttatttcaaattactgattta
ttgatgaatattacaaagcatgttttaaagccaaagcatgagatactgactccagaggag
aaacaaaagcttttaagtaaatacaatgtggaggaaaaacagctgcctcgtatattagag
gctgatgcagttgccacatactatggacttgagccgggacaggtggtgaaagttacttat
gacagtgaagttactgggttacatgttacttaccgttgtgtcatgtga

DBGET integrated database retrieval system