Magnolia sinica: 131249218
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Entry
131249218 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131249218 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
msin
Magnolia sinica
Pathway
msin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131249218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131249218
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131249218
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
131249218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
131249218
NCBI-ProteinID:
XP_058105834
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Position
6:complement(98643151..98710097)
Genome browser
AA seq
897 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKRFQVYDTENANQKEKFEADLKKEIKKLQR
YRDQIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKVCEKETKTKAFSKEGLGQ
QPKTDPKEKAKSETRDWLNNVVGELESQIDNFEAEVEGLSVKKGKTRPPRLTHLEASIVR
HKAHIVKLELILRLLDNDELSPEQVNDVRDFLEDYVERNQEDFDDFSEVDDLYNTLPLDK
VESIEDLVAIAPPALVKGVGSVSTASAVLGLKTSIATSPTPLSVTLTPSSQQSTSIQEQA
EETASQDSNSDIAPRNPFSKNGITGSSVSTATAGTGSGTPTGTNTSIASSNISGRNLVGG
STASAILSGPVYVKGSMENSVAPALSSPITLATSAKEDENTSFPARRASPVLTDIGTGRG
IGRGSVLGGASSQASTVPLSLSSGSGIPSNGALGAGPAVSDLTKRNILGADERIVSGSPV
AQPLASPLSNRTLLQQVSKATDVTGSADPNNIREGAIIGGRVFSPSPVTGVQWRPPSASS
FQNQNEMGQVRGRTEIAPDQREKFLQRLQQVQQQGHSYLPLQLNSQSSSLSHQVGLGLGA
QSPMGLNAVTSSSLQLQNAMHQQSAQHADTGNVKVEDQQQQQNSSDDLNVESATSTGLNK
NLMNEDDLKSPYAVDTPAVGSGPLTEATQVHRDIDLSPGQPLQPNQSSVGLGVIGRRSVS
DLGAIGDNIIGSTGNSGAIHDQSYNLQMLDAAYYKLPQPKDSERAKNYIPRRPAKTPPSY
PQVQAPIVDNPAFWERLGADTSGTDTLFFAFYYQQNTYQQYLAARELKKQSWRYHRKYNT
WFQRHEEPKVTTDEYEQGTYVYFDFHIADDDLQHGWCQRIKTEFTFEYSYLEDELVV
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgagccgaaaactgcagggcgagatcgatcgggtcttgaagaaagtccaggaa
ggcgttgatgtattcgacagtatctggaacaagcgttttcaggtctacgatacagagaac
gcgaatcagaaggagaaattcgaagctgatctgaaaaaggagatcaagaagctccagaga
tacagagatcagatcaagacatggatacagtcgagtgaaataaaggataagaaggttagt
gcctcttatgagcaggctctgctggatgctcgcaagctcatcgaacgtgaaatggaacgg
tttaaggtctgtgaaaaggagacaaagacaaaagccttctcaaaagaagggttgggtcaa
caacctaaaactgatccaaaagagaaggctaagtcagagactagggattggttgaacaat
gtggtaggggagctggaatctcagattgataactttgaagctgaggttgaagggctttct
gtgaagaaaggaaagacaaggccacctcgactgactcatttagaggcatctatcgttcgg
cataaagctcatatagtgaagctggaattgatactaagactactggataatgatgagtta
agccctgaacaggtcaatgatgttagagatttccttgaggattatgttgaacgcaatcag
gaggattttgatgactttagtgaagttgatgacctttacaacactttaccattagacaag
gtggaatcaattgaagatctggttgcaatcgccccccctgctcttgtcaagggggttggt
tctgtttctacagctagtgcagttttaggcttaaagacttctattgcaacttcaccaact
ccattatctgtcacattaacacctagctctcagcagagtacctccattcaggaacaagct
gaagagacagcttcccaggacagtaattctgatattgctccaagaaatccgttttctaaa
aatggcataacgggttcttcagtttccacagctactgctggcactggttctggtacgcca
acaggtacaaacacaagcattgcttcgagcaacatctctggtcgcaacttggttggtgga
tcaactgcttcagcaatcctttcaggtccagtatatgtcaagggtagcatggagaactca
gttgctcctgctttatcatctcctataactttggctacttcagcaaaggaggatgaaaac
acaagctttcctgcccgtcgagcatctccagttctcactgatattggaacggggagaggt
attggcagaggctctgttcttggaggtgcatccagccaagcatctactgttcctttgagt
ttgagttctggcagtggaataccaagcaatggagcccttggtgcaggtcctgcagtctct
gatttgacaaagaggaacattctaggggctgatgagagaattgtaagtggtagtcctgtg
gcacagccacttgcttccccactgagcaatcgaacgctcttgcagcaagtctccaaggct
actgatgtaacaggttcagctgatcctaataacattcgagaaggtgctataataggcgga
agagttttctcaccttcaccagttactggagtacaatggagacctcccagtgcaagttca
tttcaaaaccagaatgaaatgggacaggttcgtggaagaactgagattgcgcctgatcag
agggagaaatttttgcagcggctccagcaagtccagcaacaaggtcatagctatcttcca
ctccagttaaattctcaaagctcatctctatcacatcaagttggtctgggacttggagct
cagtctccgatgggtctgaatgctgtcacatcttcctcattacagctgcaaaatgctatg
catcagcaatctgctcagcatgcagatactggcaatgtgaaagtagaagaccagcagcag
caacagaattcatctgatgatttaaatgtggaatctgctacaagtactggactcaacaag
aacctcatgaatgaggatgatttgaagagcccatatgcagtagatacacctgctgtaggt
tctggccctttaacagaagctacccaagtgcatagagatattgatctctctcctggacaa
cctttacaaccaaaccaatcttcagttgggcttggtgtcattggtcgaagaagtgtttca
gaccttggtgccatcggtgataacattatcggatcaactggaaattctggagcaattcac
gatcaatcatacaacttgcaaatgcttgatgctgcctattacaagcttcctcaacccaaa
gattcagaacgtgcaaagaactatattccaaggcgccctgcaaagactcctcccagctac
cctcaagtgcaggcaccgattgttgacaatcctgcattctgggaacggttaggtgctgat
acttcgggtacagataccctgttctttgctttttactatcaacagaatacttaccagcaa
tacttagctgcgagagagttgaaaaagcagtcctggagataccaccggaaatataacacg
tggtttcaacggcatgaggagccgaaagtcacaactgatgaatatgagcagggaacgtat
gtgtactttgatttccacattgcagatgatgacttgcagcatggatggtgccagagaatc
aagactgagttcacatttgagtatagttatcttgaagacgagctcgttgtatag
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