Magnolia sinica: 131249808
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Entry
131249808 CDS
T09699
Name
(RefSeq) LOW QUALITY PROTEIN: protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
msin
Magnolia sinica
Pathway
msin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131249808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msin03400
]
131249808
DNA repair and recombination proteins [BR:
msin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
131249808
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
P2_N
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
131249808
NCBI-ProteinID:
XP_058106548
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Position
6:complement(103277830..103299912)
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AA seq
694 aa
AA seq
DB search
MDGVDKRIHYETPHIPVHTWLATAGVDAFRVRVHHKRTSLLLGEQVTIQNAPDAAADGSV
PVQELEECDHSMFSRDDLGYVCRICGVIQKSIETIFDYQWIKGSKSTRTYMSNSRSTRDA
DGAASNLFSGHSDHDLTVTEITVHPRRMKQMKPHQLEGFNFLLRNLITDKPGGCILAHAP
GSGKTFMIISFIQNLLGKYPHARPLIVPPKGILPTWKEFQRWQVENIPLLDFYSSKADNR
SQQLVVLNNWVEXKSILFLGYKQFSNIICDCKSSKTEAACREMLLKVPSLLILDEGHTPR
NDNTDVQHSLSKVQTPRKVVLSGTLFQNHVQEVFNILNLVRPKFLKLEDSRAVVRRVLSR
VHISGGSRRQCRTGVDTTFFDLVEETLQNDDDFKTRISVIQDLREMTKNVLHYYKGDFLE
ELPGLVDFTVLLNLSTKQKNSIERLTKLDKFKRRAVTSAFYIHPHSKEISENVEGGEKGV
VLSDEKIDKVVEKVEVKDGVKTKFFLNILGLYVSSGEKLLVFSQYLLPLKFLERLLVRVK
GWSPGKEIFMISGDSMTEHREWSMEQFNNSPDAKVLFGSIKACGEGISLVGASRVLILDV
HLNPSVTRQAIGRAFRPGQLKKVYTYRLVAADSQEEEDQRTCSRKELISKMWFEWSELCN
SSDFDMEEIDVKSCEDSFFESSFLGEDVKLLYRK
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgtggataaacggatacattacgagactccccacatacctgtccatacgtgg
ctggcgacggcaggggttgacgcattccgcgtccgtgtgcaccacaagcgcactagcctt
ttgcttggtgagcaagttaccatccagaacgccccagatgctgccgcagatggttcagtt
cctgtacaagaactagaagaatgtgatcattcaatgttttccagagatgatttgggctat
gtttgccgtatatgtggagttatccagaaaagcatagagacgatatttgactaccagtgg
attaagggttcaaagagtacaaggacatacatgtccaactctcgaagtaccagggatgct
gatggagctgcatcaaatctgttttctggacattctgatcacgatcttacagtgacagaa
atcactgttcatcccaggcgtatgaagcaaatgaagccccatcagttagagggttttaat
ttcttgttaaggaacttaataacagataagcctggtggttgcattttggcacatgcccca
ggatccggaaagacattcatgataatcagttttattcagaaccttttgggtaagtatccc
cacgctcgaccgctgattgtaccccctaagggaattcttcccacttggaaggagttccag
agatggcaagtcgagaacatccctttacttgacttctactcttcaaaggctgataacagg
tcccagcagctagttgtattaaataattgggttgaataaaagagcatcctttttctaggt
tacaagcagttctcgaacatcatctgcgactgcaaaagcagcaagacagaagcggcttgt
cgggaaatgttgctgaaggtccctagccttcttattctagatgaaggtcacacacctagg
aacgataacacagatgtacaacattccctttctaaggtgcaaacacctcgcaaggtagtg
ttatccgggacgctattccaaaatcatgtccaggaagtattcaacatcctgaacctcgtg
cggccgaagtttttgaagttggaagattctcgggctgtcgtgaggcgtgtgctgagcaga
gtgcatatatcaggcgggagcaggaggcagtgtagaactggtgtggatacgacctttttt
gatctggtcgaagagacgctccagaacgatgatgatttcaaaacaaggatttcagtaatt
caggacctccgggaaatgacgaaaaatgtgcttcattattacaaaggagacttcttggag
gaactgcctggactggtcgacttcactgtgcttctaaatctctcgaccaagcagaaaaat
tccattgaaagattgacaaagttggataagttcaagaggagagctgtgacgagcgctttc
tatattcacccacactcgaaggaaatttcggagaatgtggagggaggcgagaagggggtc
gtcctcagtgatgagaagatagataaggtggtagagaaagtggaagtgaaggatggagtg
aagacgaaattctttctcaatattttgggcctgtatgtatcttctggagagaagcttttg
gtgttcagtcagtatcttctcccgctgaagtttttggagagattgcttgtcagagtaaag
ggctggagtcctgggaaggaaatctttatgatctctggtgactcgatgaccgagcaccgg
gagtggtcaatggagcaatttaacaactcgcctgatgctaaggttctctttggctccatc
aaggcctgcggagaaggcatatccctggtgggtgcgtctcgggtgctgattttggatgta
catttgaacccatcagttacccgccaagcaattggacgtgcgtttcggccaggccaactg
aagaaagtttacacgtacaggttggttgctgccgactcccaagaagaggaagaccaacgt
acttgttctaggaaggagttgatttcgaagatgtggtttgaatggagtgaactttgcaac
agcagtgactttgatatggaagagattgatgtgaaaagctgtgaagactcgttctttgaa
agctcatttttaggagaagatgtgaagcttctttacagaaagtga
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