KEGG   Magnolia sinica: 131251121
Entry
131251121         CDS       T09699                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
msin  Magnolia sinica
Pathway
msin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131251121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msin03041]
    131251121
   03400 DNA repair and recombination proteins [BR:msin03400]
    131251121
Spliceosome [BR:msin03041]
 Complex B
  Other components
   Prp19 complex
    131251121
 Complex C
   Prp19-CDC5 complex
    131251121
DNA repair and recombination proteins [BR:msin03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    131251121
SSDB
Motif
Pfam: BCAS2 MobC_2 Arc_MA HMMR_N
Other DBs
NCBI-GeneID: 131251121
NCBI-ProteinID: XP_058107624
LinkDB
Position
7:14939816..14973897
AA seq 249 aa
MASGDILMLEAPPPTKPLVGPTEIIIDSLPYIDDDYADPTVKSEVDRLVEDEMRRSLKKP
ADFLKDLPPLPKFNFEKHPMLAREYERVRAGKPPAMLEMSRYGLEPPPINKRNDVSAWRH
SLRNAQSVLQHQIIRIENLDLMLNHGVDVWKHHNQRLEAFLSRMQAIALGHNEMIEVVNR
ERKFHQQNTSVELNALEAQWKELCTKNIEIQVACAKIENHIEELGREAAERGLNLEANTE
SGQALRLGD
NT seq 750 nt   +upstreamnt  +downstreamnt
atggcgagcggagatattctaatgctggaagcccctcctcctactaaacctttagtgggc
cccacagagatcatcatcgactcactgccgtacatcgatgacgactatgccgatccgacc
gttaaatcagaggttgatcgactcgtggaagacgagatgcgaaggagcctcaagaagcct
gcagacttcctcaaagacctccctcccctacccaaattcaacttcgagaagcaccctatg
cttgcccgagaatatgagcgcgtaagagctggaaagcctccagcaatgctggagatgtcc
cgatatggattggagccgccacccataaacaagcgaaatgatgttagtgcttggaggcat
tcccttcgaaatgctcaaagtgtactgcaacatcagataataagaattgagaatctggac
ctaatgttgaatcacggtgttgatgtttggaagcatcataatcaacggttggaggcattc
ttgtccaggatgcaagcaatagccctgggacacaacgaaatgattgaagttgtgaatcgt
gagagaaaatttcatcagcaaaacacatctgttgaactcaatgcccttgaggctcaatgg
aaggagctctgcacgaagaacatagagatccaagttgcatgtgctaaaatcgagaatcac
attgaagaacttgggagggaagctgcagagagaggattgaacttggaggctaatacggaa
agcggacaggcgctgcgcttgggtgattga

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