KEGG   Magnolia sinica: 131251245
Entry
131251245         CDS       T09699                                 
Name
(RefSeq) histone deacetylase 9
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
msin  Magnolia sinica
Pathway
msin03082  ATP-dependent chromatin remodeling
msin03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:msin00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    131251245
   03083 Polycomb repressive complex
    131251245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:msin03036]
    131251245
Enzymes [BR:msin01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     131251245
Chromosome and associated proteins [BR:msin03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     131251245
   HDAC complexes
    Sin3A-HDAC complex
     131251245
    BRAF-HDAC complex
     131251245
    REST complex
     131251245
    SHIP complex
     131251245
    MiDAC complex
     131251245
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     131251245
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    131251245
  Chromatin remodeling factors
   NuRD complex
    131251245
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 131251245
NCBI-ProteinID: XP_058107844
LinkDB
Position
1:complement(81567989..81649774)
AA seq 431 aa
MPSKDRIAYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQHLFASELARYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDMFFPGTGDVKETGEREGKYYAINVPLKDGIDDTSFTRLFKT
IIAKVVETYLPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLDTELPNEIPDNEYIKYFAPEFSLKIQNGNIENLNSKSYLGTIK
MQVLESLRCIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERVDQHTQDKQVQRDDEYYEGD
NDNDHNMDDAV
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgccttcaaaggacaggatcgcctacttctacgacggagatgtgggcaatgtttacttt
ggtccgaatcatcctatgaagccacatcgtctttgcatgacacaccaccttgtactctcg
tatgaccttcacaagaagatggaaatatatcggccgcacaaggcatatcctgttgagctt
gctcagttccattcagcagattatgttgagttcttgcaccggattactcctgatacacag
catctgtttgcaagtgaattagcaagatataaccttggcgaggattgccctgtgtttgag
aacttgtttgagttttgtcaaatttatgccggtggcacaattgatgctgctcgcagattg
aacaatcaactctgtgacattgccataaattgggctgggggtttacatcatgcaaagaag
tgtgaggcatctgggttttgttatatcaatgatttagtcttgggaattctagagctcctc
aagtatcatgctcgtgttttatatatcgatatagatgtgcatcacggtgatggagttgaa
gaagccttctatttcactgatagggtgatgactgttagctttcacaagtatggtgatatg
ttctttcctggcacaggtgatgttaaggaaacaggagaaagagaagggaagtattatgcc
ataaatgtcccacttaaggatggaatagatgacactagttttactcggctttttaaaaca
attattgccaaggttgtcgaaacgtatcttccaggtgctattgttcttcaatgtggggct
gattcacttgcaggggatcgcttgggctgcttcaacctctccattgatggtcatgctgaa
tgtgtcagatttgtgaagaaatttaatttgcccctattggttactggaggtggaggatac
acgaaagagaatgtagctcgttgctggactgttgaaactggagttcttttagatacagag
cttccaaatgaaattccagataatgagtatattaaatattttgccccagaattttccttg
aagattcagaatggcaatatagagaatctgaatagcaagtcataccttggcacaatcaaa
atgcaagtcctggaaagcttacggtgtatccaacatgcccctagtgtacagatgcaggag
gttcctcccgacttctatattcctgattttgacgaagatgagcagaatcctgatgaacga
gtggaccagcacacacaagataagcaagtccagagagacgatgaatattatgaaggtgac
aatgacaatgatcacaatatggatgatgcagtgtaa

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