Magnolia sinica: 131251819
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Entry
131251819 CDS
T09699
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
msin
Magnolia sinica
Pathway
msin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131251819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msin03041
]
131251819
Enzymes [BR:
msin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
131251819
Spliceosome [BR:
msin03041
]
Complex C
Other components
Step II factors
131251819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
AAA_22
HA2_N
DEAD
AAA_19
nSTAND3
ABC_tran
ATPase
PhoH
Motif
Other DBs
NCBI-GeneID:
131251819
NCBI-ProteinID:
XP_058108764
LinkDB
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Position
7:95447422..95469596
Genome browser
AA seq
729 aa
AA seq
DB search
MPSIASSSSSSQLPHIKNSHQNPQPNGKKSQTNFRDDSLRRKQLIAQQKKSLPIASVEKR
IVEEVRKNDILIIVGETGSGKTTQLPQFLFNGGFCHDGRVIGITQPRRVAAVTVAKRVAE
ECGVELGQKVGYSIRFDDVTSSSTRIKYMTDGLLLREALLDPLLSRYSVIIVDEAHERTV
HTDVLLGLLKDVQNARSRSTIQQNNSGKMNAHNGRVIDKEDNARCHRHLKTCQGPKVPPL
KLIIMSASLDARGFSEYFGGARAVHIQGRQHPVDILYTYHAEPDCLDAALITIFQIHLEE
SPGDILVFLTGQEEIESAERLVQERVQQLPEGSQKILTIPIYSSLPSEQQMKVFRPTPSG
FRKVILATNIAETSITIPGIKYVIDPGLVKARSYNPLTGMEALIIIPTSKAQALQRSGRA
GREGPGKCYRLYPESEFSKLVDSTVPEIKRCNLSNVVLQLKALGIDDIIGFDFMEKPSRM
AIVKSLEQLFVLGALTNDYKLSEPVGRQMGSLPLDPMYSKALILASEFNCLEEMLITVAV
LSVESIFYTPREKLEEARAARKLFSSLEGDHITLVNVYRASAECLQKSKMANSKEKTTEK
RLNKWCRENFINSRSLRHARDIHSQIQGHAKQLGLHISSCGDDMVQFCRCLAASFFLNAA
LKQPDGSYRAMASSQLVQIHPSSVLFRTKPECIIFNELVRTNHNYVRNITRIDPLWLPEL
APQYYATQN
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgccttccattgcttcttcttcttcttcttcccaacttcctcacataaaaaactcccat
caaaatccacaacccaacggcaagaagtcccaaaccaacttcagagacgattctctccga
aggaagcagttgattgcccaacagaagaaatcactgccgattgcgtcagttgagaaaaga
atcgtggaggaagtgaggaagaatgacatactaataatagttggcgaaacgggaagtggg
aaaacaacacaattgccacaatttttatttaatgggggcttctgtcatgatggaagagtt
attgggatcacacaaccacgtcgggttgctgctgttactgttgcgaaacgcgtagcagaa
gaatgtggagtggagttaggccaaaaagttgggtattcaattagatttgatgatgtaact
tccagctccacaaggatcaagtacatgactgatggacttttactaagggaagcattactg
gatcctttgttgtctaggtattctgtcatcatagttgatgaagctcatgagagaacagtc
catactgatgtgttgctaggcttgttgaaagatgtacaaaatgcaaggtcacgatctacc
attcaacaaaataattctgggaagatgaatgctcacaatgggagagtgattgataaagaa
gacaatgctcgatgccaccgtcatctaaagacatgccagggtccaaaagttcctcctcta
aagttgattataatgtctgctagtttggatgcgagaggtttttctgagtactttggtggt
gctagagctgttcatattcaagggcgacaacaccctgtagatatactttatacttatcat
gctgagccagactgcctggatgcggccttaattactatttttcagattcatttggaggag
agtcccggtgatatacttgtatttttgactgggcaagaagagattgaatctgcagaaaga
ctagtccaagagcgggtgcaacaattacccgaaggcagtcaaaagattttaaccattcct
atatattcatctcttccttcagagcagcaaatgaaagttttcaggccaaccccatctggc
tttcgcaaggtcatattggcaacaaatattgctgagacatcaataacaatccctggaatc
aagtatgttatagatcctggattggtgaaggctcgttcttacaacccactcacagggatg
gaagcactgattatcatcccaacctcaaaagcacaagctcttcagcggagtggtcgtgca
gggcgtgaaggacctggcaagtgctatcgcttataccctgagagcgaatttagtaaactt
gtggattccactgtcccggagatcaagcggtgcaacctctcaaatgttgtactacagctt
aaggctctaggcattgatgatattatcgggtttgacttcatggaaaagccttcgaggatg
gctattgtgaaatctttggagcagttatttgtactaggggctctgaccaacgattataaa
ctatcagaaccagttgggcgtcaaatgggcagcttgcccttagaccccatgtactcaaag
gcactcattttagctagtgaattcaactgtttggaagaaatgttgatcactgttgcggtg
ctctctgtggaatcgatcttttacacccctcgggaaaagttggaagaggcaagagctgcg
aggaagcttttttccagtctagagggagaccacatcacattggttaatgtatatcgggca
tctgcagagtgcttgcagaagagcaagatggcaaacagtaaagagaaaacaactgagaaa
cgcttgaacaaatggtgcagggaaaatttcatcaatagccgttccctgaggcatgccaga
gacattcacagccaaattcaagggcatgccaaacaattgggtctgcatatttcttcatgt
ggggatgatatggtgcagttctgcagatgtcttgctgcatcttttttcctaaatgctgct
ttgaaacagcctgatggatcatacagggctatggcaagcagtcagctagttcaaatccac
ccttcttcagttttatttcggacaaaaccagaatgtattattttcaatgaattggtgcga
acaaatcataattatgttcgaaatataacaagaatcgatccgctgtggctacctgagttg
gctccacaatactacgccacacaaaattag
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