KEGG   Magnolia sinica: 131251830
Entry
131251830         CDS       T09699                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 1-like
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
msin  Magnolia sinica
Pathway
msin03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:msin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    131251830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msin03021]
    131251830
Enzymes [BR:msin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     131251830
Transcription machinery [BR:msin03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     131251830
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3
Other DBs
NCBI-GeneID: 131251830
NCBI-ProteinID: XP_058108779
LinkDB
Position
7:complement(95717526..95768477)
AA seq 1817 aa
MEESTTSTLAIDGRICGIRFSISTVEEICTSSISGCPISHPSQLTNPFLGLPLESGKCES
CGTSEHGKCEGHFGYIKLPIPIYHPSHVSGLKHILSLVCLKCLKLKKGKVLHSHGKKRST
NTSCSCLDVSAISVKEVKTTDGALCLELKLPSRSRLRDGFWNFLDRYGFHHGGESLCRPL
LPYEVLQILKNFPEETKRKLAVKGYFPQNGFILQCLPVPPNCLSVPDISNGTTIMSSDIT
SSMLRKVLNKVEIINRSRSGSPNFESYQIEANDLQSAIAQYMNLRGTTKAPHDITRKYGA
VKGVDDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKGIHEIGLPLEIAQKITFEEKV
TAYNMDHLQKLVDDKLCVTYRDGSATYAIREGSKGHTYLKVGQIINRRIMDGDIVFINRP
PSTHKHSLQAFSVYVHDDHTVKINPLICAPLGADFDGDCVHIFYPQSLAAKAEVLELFSV
EKQIRSSHSGSLNLQLVHDSLLSLKLMFKTFFLNKATAQQLAMCVSPVLPEPALLKAHRT
GPLWTVLQIVQSALPAFFDCFGERHLISKSEMVRIDFNRDLLQSSFTEIVTSVLDKKGTE
EAVKFFNMLQPLLMEILFLEGYSVGLNDFDIPKAVTEDIKKKIQDISPLLLHLRSNYNEL
VELQVESYLKTVKLPIVTRILKLSALGNLIDSKNDSAISKVVQQLGFLGLQLYDRGKFYS
RRLVEDMSFHFQNKYSVNGVDYPSEAFGLVKSSFFQGLTPYEELVHSISSREVLIRSSRG
LTEPGTLFKNLMATLRDVVICYDGTVRNLCSNSIIQFEYGQVDENSPGSSLAGEPVGVLA
ATAVSNPAYKAVLDSSQSNNSSWESMKEILLCKVNFKNDIIDRRVILYLNECFCGKMHCK
ENAAYLVQNRLKKVTLKDVAFDFSIEYQRHRQIPESSEADTGLVGHIHLDKMRLKGLDRS
MDEILHSCQEVINCFGRKKHALSPFFKKIYLSSCECCTLQQQCDEKWSQLPCLQFFYKDG
NGGPQGEQGDTIEKTLQIMAEAICPILLGTLVNGDPRVHMANIIWIGSDSTTWVRNDGKL
RKGEVAVEVVIEKDAAKKSGDAWRVAMDSCLPVMHLIDTRRSTPYGVQQIQNLLGISCAF
GQSVQRLSTSIKMVAKGVLKEHLMLVANSMTCSGNLIGFNTAGYKALFHSLNVQVPFTAA
TLFRPIKCFERAAERCHTDSLSSIVASCSWGKHVAVGTGTPFQIMWSKKEVASNLDVVTD
VYDFLHLVSTISSEKEVSNECLGADVDDLYEENGNMEFCPSPELNSASEKPTFDDSAEIQ
RNLEDTELENGKANMSCWGQAAAAEVKSNGWGGWDVDKHPNSSKNDITPSKTSVWSSWDT
DKMETQATQPIQSSELPGTSSWNGIGDAKKKHHTQSDQSNAWGCWGSNSVGDAEKMHQTQ
ADQPIAHGGWDSNSMGDVKKHQTQSDQSNAWGGWSSNKKETQASESKRPTAEECPVFNSW
NRTEVQKKQPVQSDQSTPWGGWKSNDAGNERVEDVKSQDVNCWNQPNDSSAKPHVWDKDK
MHGQSNSVWGSQSPKGTHTERSSDIGGWNEDRGQDELNQPTRSPVWSSSPIEKSSDDSSW
KENRAHDWSNRPTRAPGWGSSSAGDRRNQRSRSTQSPAPVGPDGRNANGILTATGRRLDL
FTCEEEKILNDVEPISLSTKRILHNSSYNDGDRLSDEDQSWVLDNVFQHHPDKATKMGEK
IDYVTVGKHDKYQGTRCFFVVSTNGFRADFSYLKCLENYVKEKYPDGAEAFNQKYFKKRR
SEGMNQQQTGMNQQQTQ
NT seq 5454 nt   +upstreamnt  +downstreamnt
atggaggagagtacaacatcaacccttgctatagatggaagaatatgtggtatccgattt
agtatatccacagttgaggaaatttgtacatcgtctataagtggctgtccgattagccat
cccagtcagctcacgaatcctttcctcggcctaccattggagtcagggaaatgcgaatcc
tgtgggacgtctgaacatggaaagtgcgaaggtcattttggatacataaaattgccaata
ccgatatatcatccatcccatgtcagtggattgaaacatattttaagcttggtgtgctta
aagtgcttgaagcttaaaaagggaaaggtattgcacagccatggaaaaaaaagatccaca
aatacttcatgttcttgtctggatgtttcggcaatttcagttaaggaagtaaaaacaaca
gatggtgctctttgcttggaattgaaactgccatctaggtcaaggctgcgtgatggtttt
tggaactttctagatagatatgggttccatcatggtggcgagtccttgtgtcgccccttg
cttccttatgaggtgctgcaaattttgaaaaatttcccagaagagacaaaaagaaaacta
gctgtgaaggggtactttccccaaaatgggtttattttgcaatgcctgcctgttccccca
aactgtttgtctgtgccagatatttccaatggaactactatcatgtcttctgatattact
tcatccatgcttagaaaagttcttaacaaagttgaaatcatcaatagatcaagatctggt
tctccaaactttgagtcatatcaaattgaggctaatgacttgcagtcagctattgcacag
tatatgaacctcaggggcaccacaaaggcacctcatgacattactaggaagtatggggct
gttaaaggggttgatgattcttccacaaaggcatggcttgaaaagatgcggacactgttt
atcaggaagggatcggggttctcttctcgtagtgtgattactggggatgcatataaaggg
attcatgaaattggtttaccattagaaattgcccaaaagatcacttttgaagagaaggtc
acggcatacaacatggatcatttacagaaactagtggatgacaaattatgtgtaacatac
agagatggttcagccacttatgcaattagggaaggttcaaaaggtcatacatatttgaaa
gttggtcaaatcataaataggcgtattatggacggagacattgttttcattaataggcca
cctagtactcataaacattcattacaagcattttctgtctatgtgcatgacgaccatact
gttaagatcaatcctcttatttgtgctcccctaggtgcggattttgatggggattgtgtt
catatattttatccacagtctctagcagcaaaggcagaagttttggagctgtttagtgtt
gaaaagcaaatccgtagttctcatagtggtagtctgaatttacaactggtgcatgattct
ttattgtcacttaaactcatgtttaagacttttttcttgaacaaagcgactgcgcaacaa
ttggctatgtgtgtttcaccagttttaccagaacctgctttgcttaaggctcaccgtaca
ggtcctctgtggactgttttgcaaatagtacagagtgctttacctgcgttttttgactgc
tttggggagaggcatttgatcagtaaaagtgaaatggtgaggattgatttcaatagagat
ttactgcagtcatcattcacagagattgttacttctgttcttgacaagaagggaacagaa
gaggctgttaagttctttaatatgttgcagccgttgctgatggagattctctttttagaa
ggatatagtgttggcttgaatgattttgacattcccaaggccgttactgaagatataaag
aagaagattcaggacatatcacctttgctacttcacttgagatcaaattacaatgaactt
gtagagttgcaagtggaaagctacctgaaaactgtaaaactgcctatcgtgactcgtatt
ctaaagttatctgctttgggtaatttgatagattctaaaaatgattcagctatcagtaag
gttgttcaacaacttggctttttggggcttcaactttatgaccgagggaagttttattca
aggcgtttagttgaggatatgagtttccacttccaaaataagtattctgttaatggtgtt
gactatccttctgaggcatttgggttagttaagagctccttttttcaaggtctgaccccc
tatgaagagttggtccattccatatcatccagggaagtgttgatccgttcttccagagga
cttactgaaccaggaactttgtttaaaaatctaatggccacacttagagatgtcgttatc
tgttatgatgggacagtgagaaacctctgcagcaattctataattcaatttgagtatgga
caggtggacgaaaatagtcctggaagttctcttgctggtgaaccggttggtgtattagct
gctactgcagtatcaaatcctgcatataaagcagttcttgattcttctcagagcaacaac
tcttcatgggaatcgatgaaggaaatacttttgtgcaaagttaacttcaagaatgatatt
attgatcggagagttattctatatttgaatgagtgcttctgcgggaaaatgcattgcaag
gagaatgcagcatatttagttcagaatcgtttgaaaaaagtcactttaaaggatgttgct
tttgacttctccattgaataccaaaggcatcgacaaatacctgaaagttcagaagcggat
acaggccttgttggccacattcaccttgataagatgcgcttgaaaggactcgaccggagc
atggatgagatcctgcactcttgtcaagaggttataaattgctttgggagaaagaagcac
gctctttcacctttttttaagaagatttatttgtcttcctgcgaatgttgcacacttcag
caacaatgtgatgagaagtggtctcagctgccatgcctgcagttcttctacaaagatgga
aatggtggtccgcagggtgagcagggtgatacgattgagaaaactttgcagatcatggct
gaagctatctgcccaattttgttggggactctggttaatggtgaccctcgagtgcatatg
gccaacattatttggattggttcagattcgacaacttgggtgagaaatgatgggaagttg
cggaagggtgaggtagctgttgaagtggtcattgagaaagatgcagccaaaaaaagcggt
gatgcttggagggtagccatggattcatgcctacctgtgatgcacttaatcgacacgagg
agatcgacaccatatggtgttcaacaaattcaaaacctgctcggaatttcatgtgctttt
ggtcagtcagttcagcgactgtcaacatctataaaaatggttgcaaaaggcgtgctaaaa
gaacatcttatgcttgtggcaaatagcatgacatgcagtggaaatcttattggtttcaat
actgctggctacaaggccctgtttcactctttgaatgttcaagtcccatttacagcagcc
acattatttaggccaattaaatgttttgagagagcagctgaaaggtgtcacacggattca
ctatccagtatagttgcatcatgttcttggggtaaacatgtcgccgttggcacaggaaca
cctttccagattatgtggagcaagaaagaggtggcatcaaatctagatgttgtaacagat
gtgtatgatttcctccatttggtaagcactatttctagtgaaaaagaagtaagcaatgaa
tgtctaggtgcagatgttgatgatctttacgaggaaaatggaaacatggagttttgtcct
tcaccggagctcaactcagcatctgagaagccaacgtttgatgactctgctgagattcag
cgcaacttggaggatacggaacttgagaatgggaaagctaacatgtcatgctggggacaa
gctgcagctgcagaagtgaaatcaaatggttggggtggctgggatgttgataaacatccc
aattcaagcaaaaatgatataacaccatccaaaacaagtgtttggtctagttgggatact
gataaaatggaaacacaggcaactcaacctatccaatcatcagaattgcctggaaccagt
tcttggaatggtattggagatgcgaaaaagaagcaccatacgcaatcagatcagtctaat
gcctggggttgctggggcagtaatagtgtgggagatgcggaaaagatgcaccagacgcaa
gcagaccagcctattgctcacggtggctgggacagtaatagcatgggagatgtgaaaaag
caccagacacagtcagatcagtctaatgcatggggtggctggagtagtaataaaaaggaa
acacaggcaagtgaatctaaaagaccaacagcagaggagtgtcctgtatttaattcttgg
aatagaacagaagtgcaaaagaagcagcctgttcaatctgatcaatctactccctgggga
ggttggaaatcaaatgatgcaggaaatgagagggttgaagatgttaaatcccaagatgta
aattgttggaaccaaccgaacgattcatctgccaaaccacatgtttgggataaggacaag
atgcatggtcaatctaattctgtctggggtagtcagagcccaaagggtacccatacggag
agatcttcagacattggtggttggaatgaagacagaggacaagatgagttgaatcaacca
acaagatctcctgtttggagttcttcccctattgagaagtcttcagatgacagcagttgg
aaagaaaatagagcacacgattggtcaaatcgaccgactagagctcctggatggggttct
tcgagtgcgggtgaccgaagaaaccagagaagccgttctacccagtcacctgcacctgtg
gggcctgatggtcggaatgctaatgggattctcactgccactggaagacgcttggatcta
ttcacatgtgaggaagagaaaattcttaatgatgttgaaccaatttccctgtcgacaaaa
cgaattctacataattccagctacaatgatggtgatcggctatcagatgaagatcagtcc
tgggtactcgataatgtttttcagcaccatcccgacaaagcgacaaaaatgggtgaaaag
attgactatgtcacggttggtaagcacgacaaataccaaggtaccaggtgcttttttgtc
gtctccacaaatggttttagagcggatttctcttacctcaaatgcctggagaactatgtc
aaggagaagtaccctgatggtgctgaagccttcaaccaaaagtatttcaaaaagcgccgg
tcagagggcatgaaccagcagcaaacgggcatgaaccagcagcaaacacagtag

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