Magnolia sinica: 131252846
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Entry
131252846 CDS
T09699
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131252846
04121 Ubiquitin system [BR:
msin04121
]
131252846
Enzymes [BR:
msin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131252846
Membrane trafficking [BR:
msin04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
131252846
Ubiquitin system [BR:
msin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131252846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
DUF7573
Rad50_zn_hook
zf-Nse
Motif
Other DBs
NCBI-GeneID:
131252846
NCBI-ProteinID:
XP_058109579
LinkDB
All DBs
Position
8:10515664..10517814
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AA seq
385 aa
AA seq
DB search
MSSTAMSSSSYWCYRCSRFVRVWDRDAVVCPDCDGGFIEEVDHPPRPTPRRRFPSAAMYM
LGNRPNSDQTAGLGFRRSRRNGGDRSPFNPVIVLRGPADGGGAEAGGGGVAGGERGSFEL
YYDDGAGSGLRPLPTSISDFLMGSGFDRLLDQLAQIEINGVGRCEHPPASKAAVESMPTI
EIVDSHVVTESHCAVCKEPFELGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPTD
VRGRSSPDLDRSPDQQSPTAAEEETVGLTIWRLPGGGFAVGRFSGGRQAGERELPVVYTE
MDGGFNTGGAPRRISWASRGNRSRESGRLRRAFRDFFSFFGWLRPSSSNTESGSSRRSRS
LVFSRASRRRSGTWALEDGNGISRW
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgacggcgatgtcgtcttcttcctactggtgttaccgctgcagccgattcgtc
cgtgtgtgggaccgagatgccgtcgtctgccccgactgcgacggtggattcatcgaagag
gtggaccacccgccacggcccaccccacgccgtcgattcccctccgcagccatgtacatg
ctcggcaaccgccccaattccgatcagactgccggtctcgggttccgccgcagccgtcgc
aacggtggtgatcgttcgccgttcaatcccgtgatcgttctccgaggcccagctgatggg
ggaggagcggaggccggcggtggtggtgtcgctggcggtgagcgaggaagcttcgagctc
tattacgatgatggtgcggggtctggcctccggccgctgcccacaagcatctcggacttc
ttgatggggtccggattcgatcggctgctggatcagctggcccagattgaaatcaatggt
gttgggcgctgcgagcatcccccggcatcgaaagctgctgttgaatcaatgcccacgatt
gagatcgtcgatagccatgtcgtcacggaatcgcactgtgccgtctgcaaggaaccgttc
gagcttggatcagaggcccgtgagatgccttgcaagcacatctaccactcggattgcatc
ctcccctggctttcactccgtaattcatgccctgtctgccgccatgaattgccaacagat
gtccgcggccggagctcgccagacttggatagatcaccagaccagcaatcgccaaccgct
gctgaggaagagacagtggggctgacaatatggaggctgccaggcggtgggtttgccgtt
gggaggttttcaggtggtcgtcaggctggggaacgggagcttcccgttgtctacacagaa
atggatggtggtttcaacacaggcggtgccccgaggaggatctcatgggcttcaagaggg
aaccggtcgagagagagtggtagacttagacgggctttccgtgatttcttctcctttttt
gggtggttacggccctcatcttcgaatacagaatctgggtcttcccgcagatcgcgaagt
ttggttttcagtagagcctcgaggaggcgttctggcacttgggcattggaagacggcaat
gggatctccagatggtga
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