Magnolia sinica: 131252879
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Entry
131252879 CDS
T09699
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msin03016
]
131252879
Enzymes [BR:
msin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
131252879
Transfer RNA biogenesis [BR:
msin03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
131252879
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Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-GeneID:
131252879
NCBI-ProteinID:
XP_058109624
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Position
8:11946062..11976812
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AA seq
814 aa
AA seq
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MAVRAVNSCFIFRSAYSSPPHIPSLPALRCRRRCFHFCPLNSHINPKLGFSFSKSRSENG
PVFGHHIRFVHSLVDIVMEELEAMRSRKRIRARSNKLYSGHFKLFRLLICWCRMVVMSSK
ALVEDKLEKRVLQKGLLLEFRKDSERLLLAVAQKPDGKKNWMVSDQNGVTSSIKPQQITY
IVPGVEDFDHTEIADFIQKAQSLLDPSLLEYAWMELLEKNKSVTAEELAEIIYGSMEPLE
SYSAHILLSKDEMYFSVIESKGSCSVYQPRPNVQVEELLRRKHAKEASEKELEEFVQLLK
SAKSVPPHLKPPKCSWTTEEKIKNRVESLEAYAIDACKNDDQKKTAGMILKAMGLPKMSS
AAVNLLVDIGYFPVHVNLDLLKFNVRTEYSDEVLLAAQNLLSISPDLDKTNRKDLTFLKV
YAIDVDEADELDDALSAERLQDGQTRVWIHVADPTCLVQPQSIIEREAMRRGTSIFLPTA
TFPMFPEKLAMEALSLQQGKLCNAVSISVILHPDGSISEYTVCNSVIKPTYMLTYESASE
LLHLNLEEEAELKLLSEAAALRLQWRRQQGAIDTATMEARVKVTNPDDPEPSINLYVEDQ
SDPAMRLVSEMMVLCGEVIATFGSYNNIPLPYRGQPQSNISALAFSHLPEGPVRSSAYVK
IMRAAEMDFRKPIRHGVLGVPGYVQFTSPIRRYMDLLAHYQVKAFLRGDSPPFSAGQLEG
MSSLINLHVRVAKKLFNSSLRYWLLEFLRRQPKEKKFRALILRFIKDRMAALLLVEVGIQ
GPALVSVGKQVGDEIDVRVEEAHPRDDVLSLKEV
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcgagcagtaaacagctgctttatcttccgctccgcctactcctctcctcct
cacattccttctctccccgctcttcgatgccgtcgccgatgcttccatttctgtcccttg
aattcccacatcaaccctaagttggggttttctttctcgaaatcgcggtcggagaatggc
cctgttttcggtcatcacatccgtttcgttcacagcctcgttgatatcgtcatggaggag
ttggaagcgatgcgctccaggaagcggattcgcgcccgcagcaacaagttatattctggt
catttcaaactgttcagattattaatttgctggtgcagaatggtggtaatgagcagtaag
gcattggttgaagataaacttgaaaagcgggtcctgcagaaaggattattgctggagttt
cggaaagattctgaaaggttattgctagcggttgctcagaaacctgatggaaagaaaaac
tggatggtgtctgatcagaatggggtcacatcctctataaagccacaacaaattacgtat
attgtacctggtgttgaagattttgaccacacagaaatcgctgattttattcagaaagct
cagagtctcttggacccatcacttcttgagtatgcttggatggagcttctggaaaagaac
aaatcagtgacagctgaggaattagcagagatcatatacggtagtatggagcctctggaa
agctatagtgcccatattttgctatctaaagatgaaatgtatttcagcgtgattgagagt
aaaggatcctgttctgtttaccagcctcgccctaacgtgcaggtagaagaactgctgcgc
aggaagcatgcaaaggaagcatctgaaaaagaacttgaggaatttgttcagttactgaag
tctgcaaagtctgtgcctccccatttgaaacctcccaaatgctcatggacaacggaagag
aaaataaaaaaccgagtagagtcacttgaggcttatgctattgatgcatgcaagaatgac
gaccaaaagaagacagctggaatgatcctcaaggctatgggactgccaaagatgtcatct
gctgcggtaaatctccttgtggatattgggtatttcccagtacatgtcaacctcgatctc
ctgaagttcaatgttcgtacagaatactctgatgaggttctgttagcggctcaaaatctt
ttgtccatctctcctgatcttgacaagacaaacaggaaagatcttacattcttgaaggtc
tatgcaattgatgtggatgaggctgatgagcttgatgatgcgctgagtgcagagaggctg
caggatggccagaccagagtttggatacacgttgctgatcctacttgcctagttcagccc
caaagcataatagagcgagaggcaatgagaagaggaacctctattttcttgcctactgcc
accttccctatgttccctgaaaaacttgctatggaggcattaagcttgcagcagggaaaa
ctttgcaatgctgtcagcatctctgttattttgcatccagatggcagcatttcagaatat
accgtatgtaactcggtcatcaagcccacgtatatgttgacgtatgagagtgcatctgag
ttgcttcacttgaacctggaagaggaggctgaactgaaacttctgtccgaggctgctgct
cttcgactacaatggcgtcgtcagcagggtgcgattgacacagctacaatggaggcacgt
gtcaaggtaactaatccagatgatccggaaccttccatcaacctttatgttgaagatcag
tcggaccctgcaatgcgtcttgtctcagaaatgatggtattgtgtggggaggttatagcc
acctttggttcgtacaacaacattcctttaccttacagagggcagccccaatcaaacatc
tctgctttagcattttcccatcttcctgaaggacctgtcagaagctctgcgtatgttaaa
ataatgcgtgcagcagaaatggatttcaggaaacctatacgtcatggggtcctgggagtt
cctggttatgtacagtttacgtctcccatccgccgatatatggatcttcttgctcactat
caggtgaaagcctttctaagaggggattctcctcctttctcagcaggtcagttggaaggg
atgtcatcactgataaacctgcacgttagagtagctaaaaagcttttcaacagcagtcta
cggtattggctattggaatttctgagaaggcaacccaaagaaaagaaattccgggccttg
attcttagatttatcaaagatcggatggcagccttacttttagtggaggttggaattcaa
ggtcccgctttggtgtcagtggggaaacaggttggagatgaaatagatgttcgagtggaa
gaagctcatccacgcgatgatgtcctctctctcaaggaagtgtaa
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