KEGG   Magnolia sinica: 131252880
Entry
131252880         CDS       T09699                                 
Name
(RefSeq) uncharacterized protein LOC131252880
  KO
K12828  splicing factor 3B subunit 1
Organism
msin  Magnolia sinica
Pathway
msin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131252880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msin03041]
    131252880
   03036 Chromosome and associated proteins [BR:msin03036]
    131252880
Spliceosome [BR:msin03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    131252880
 Complex B
    131252880
 Complex C
   U2 SnRNP specific factors
    131252880
Chromosome and associated proteins [BR:msin03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    131252880
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N
Other DBs
NCBI-GeneID: 131252880
NCBI-ProteinID: XP_058109628
LinkDB
Position
8:11979017..11989030
AA seq 1272 aa
METIESDIARVQEERRKKEQELASLTAVTFDADLYGGGNRFEDYEQSIPVNEEEEDQDAG
EREVARKLASYTAPKSVLKELPRGVGVDDGDDFGFKKPQKIIDREDDYRKRRLNRIISPD
RNDAFAMGDKTPDPSVRTYGDVMKEEALKRQKEEMLREISKRKKEEEENKASEPAPSAQK
RRNRWDQSQEQDNSSSSKKVKTASSASDWDMPDSTPGIGRWDATPTPGRLADATPSVSRR
NRWDETPTPGRLADADATPTAGGATPGATPAGMTWDATPKLAGLATPTPKRQRSRWDETP
ATMGSATPMPGATPAAAFTPGLTPVGGIDLATPTPGAINLRGAITPEQYNLLRWERDIEE
RNRPLTDEELDAMFPQEGYKILDPPASYVPIRTPARKLLATPTPLGTPLYAIPEENRGQQ
FDVPKEAPGGLPFMKPEDYQYFGALLNEEDEEELSPDEQKERKIMKLLLKVKNGTPPQRK
TALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHK
ILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFS
VVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILMGCAVLPHLRSLVEIIEHG
LNDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKSIGFI
IPLMDAMYASYYTKEVMFILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRSDILPE
FFRNFWVRRMALDRRNYRQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIE
KVVTNLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQI
CGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGS
ILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPA
REWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCT
TVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPL
LEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVME
AIEGMRVALGAAAVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPVLDDEEN
NVFSRPELTMFV
NT seq 3819 nt   +upstreamnt  +downstreamnt
atggaaacaatagaatccgacatcgccagggtccaagaagagaggagaaagaaggagcag
gaacttgcctctctgaccgcagtcacctttgatgctgatctttacgggggcggcaaccgc
ttcgaggattacgagcagtcgatccctgtcaatgaagaggaggaagatcaagatgctggg
gagcgagaggttgcgaggaagctagcttcgtatactgcacctaaatcggtattgaaggag
ttgccgagaggagtgggtgtggatgatggggatgattttggtttcaagaaaccacagaaa
atcattgatagggaggatgattataggaagcggaggctgaatcggataatctcgcctgac
aggaatgatgctttcgcgatgggagacaagacgccggacccgtccgtgaggacctacggt
gatgtcatgaaggaggaggccttgaagagacagaaagaagagatgctgagagagatttca
aagcggaagaaagaggaagaggagaacaaggcctctgagcctgctccatcagctcagaaa
aggaggaacaggtgggaccaatctcaggaacaagataatagtagcagcagcaagaaggtg
aaaaccgcgtcgtcggcatcggattgggacatgccagattcaactcctgggattggccgg
tgggatgcaactccaaccccggggaggctggctgacgcgacaccatctgtttcccgtagg
aaccgttgggatgagacgcccacgcctggtcgcctggccgatgctgatgcaactccgacc
gctggtggagctactcccggagctacgccagctggcatgacatgggatgcaacacccaag
ctggcgggactcgctactccgacacccaagcgacaaagatcgagatgggatgaaacgcca
gcgaccatgggaagtgcaacaccaatgcctggagcgacccctgctgcggcattcacccct
ggcctgaccccagttggaggaattgacctcgcaaccccaacccctggagctatcaatctt
cgcggtgccattactcctgagcagtataatctgctgaggtgggagagagatattgaggag
aggaaccggccattgactgatgaagagcttgatgctatgttcccacaagaaggatataag
attctagatcctccagcttcttatgttccaatcagaactcctgcgaggaagcttcttgct
acaccgactcccttgggaactcctctatatgcgatccctgaagagaatcgtgggcagcag
tttgatgttccgaaggaagcacctggtggtttgccgtttatgaagccagaggattaccaa
tactttggtgcgttgctgaacgaagaagatgaggaagagctgtcaccagatgaacagaag
gagcggaagatcatgaagctgttgctcaaggttaagaacgggactcctccgcagaggaaa
acagcattgcgccagcttacggataaagcacgagaatttggggctggcccactgttcaat
cggattctgccattgctgatgcaaccgactttggaagatcaagaacgccatcttctagtt
aaggtcattgacagggttttgtacaagctggatgagctggtccggccatttgtacacaag
attttggtggtgattgagccactcttgatcgatgaggactactatgctcgtgtagaagga
agagagatcatttccaatctcagcaaagcggctggcttggccacgatgattgctgcaatg
agaccagatatcgacaatattgatgaatatgtcaggaacacaacggcaagggctttcagt
gttgttgcctccgcattgggtattcctgcgctgttaccgtttttgaaagctgtgtgccag
agtaagaaatcttggcaagctcggcacaccggcattaagattgtacagcagattgcgatt
ctaatgggttgtgccgtgcttccgcatctgaggtcccttgttgaaatcattgaacacggt
ctcaacgatgaaaaccagaaagtgagaactattacagcattgtctctcgctgcactcgct
gaggccgctgctccatatggtatagagagttttgattcggtcctaaagcctctgtggaaa
ggcattcgatcacaccgaggaaaggttttggcagctttcttgaaatcaattggtttcatt
attcctctcatggatgctatgtatgcaagttactacacaaaggaagtgatgtttatactg
atccgagagttccaatcgccggatgaagaaatgaagaagattgtacttaaagtggtcaag
cagtgtgtgagtacggaaggggttgaagctgattatattcggagcgatattcttcccgag
ttcttccggaatttctgggttagaaggatggcgctggaccgcagaaactataggcagctt
gtggagacgactgtagaaatagctaacaaggtcggtgttgcagatatagtaggaaggatc
gtcgaggatctcaaagacgagagtgaaccatacaggcggatggtaatggaaacaatcgag
aaggtggttacaaacttgggtgcatcagatattgatgcccggttggaagagctcctgatc
gatggtattctgtatgctttccaagaacagaccagcgacgatgcgaatgtgatgctcaat
ggtttcggtgctgtggtgaattcccttggacagagggtgaaaccgtaccttccccagata
tgtggtaccataaagtggcgtttgaacaataagagtgcgaaggtcaggcagcaagcagcg
gacctcatatcgaggatcgcagttgtcatgaagcagtgccaagaagagcagctgatgggc
cacttgggtgtggttttgtatgagtacttaggagaagagtaccctgaagtcctgggatct
atattgggagcactgaaggctatcgtcaatgtcattggtatgacaaaaatgactcctcca
ataaaggatctgctcccacgtctcactcccattttgaagaataggcatgagaaagtgcag
gagaattgtatcgaccttgtcgggaggattgctgatcgtggggcagagtttgtccctgca
agggagtggatgaggatatgttttgagctccttgagatgttgaaggcccacaagaagggg
atccggcgtgctactgtgaacacatttgggtacattgcgaaagcgattggacctcaagac
gtcttggcaacgctgttgaacaacctgaaggtgcaagagcgtcagaatcgggtctgcaca
actgtggccattgccattgttgccgaaacctgctcacccttcacggtcttaccagctctg
atgaatgagtaccgggtaccagagctgaacgtgcaaaacggggtcctgaaatcactctct
ttcctcttcgagtacataggtgagatggggaaggactacatctatgccgttacgcccttg
ctcgaagatgcgcttatggacagggatctggtgcataggcaaacggccgcttccgctgtt
aagcacatggccttgggtgttgctgggttgggctgcgaggatgctttggtgcatctgctg
aactatgtgtggcccaatatttttgagacgtctcctcatgtcataaatgctgtcatggaa
gcgattgaagggatgagggtggcgttgggcgctgcagctgttctgaactactgtcttcag
gggctgtttcatccggcacggaaagtgagggaggtgtattggaagatctacaactcgctg
tacattggatcacaagatgcacttgtggctgcctatcctgtgttggatgacgaggagaac
aatgtgttcagcaggccagagctgacgatgtttgtctga

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