KEGG   Magnolia sinica: 131252969
Entry
131252969         CDS       T09699                                 
Name
(RefSeq) THO complex subunit 4A
  KO
K12881  THO complex subunit 4
Organism
msin  Magnolia sinica
Pathway
msin03013  Nucleocytoplasmic transport
msin03015  mRNA surveillance pathway
msin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131252969
  09122 Translation
   03013 Nucleocytoplasmic transport
    131252969
   03015 mRNA surveillance pathway
    131252969
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msin03019]
    131252969
   03041 Spliceosome [BR:msin03041]
    131252969
Messenger RNA biogenesis [BR:msin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     131252969
    TREX complex
     131252969
Spliceosome [BR:msin03041]
 Complex C
  Other components
   EJC/TREX
    131252969
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    131252969
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3
Other DBs
NCBI-GeneID: 131252969
NCBI-ProteinID: XP_058109760
LinkDB
Position
8:complement(15491765..15504175)
AA seq 248 aa
MSSALDMSLDDLIKNNKKSSGGSSNLRGRGRGSSGPGPARRFPNRSATRSAPYSAGKPVP
APVLAWQHDMFADQAAAPRSTAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHY
DRSGRSKGTAEVVFSRRADAAAAVKRYNNVQLDGKPMKIEIVGTNIITPAPVPQITGSIL
GNPNVIPRSWPGRGVSMGLPRGGGSGGGGRDGRGRGRGRGRGRGRGGDQLTAEDLDADLD
KYHAMQIN
NT seq 747 nt   +upstreamnt  +downstreamnt
atgtccagcgccttggacatgtccctcgacgatctgataaaaaacaacaagaaatcgtca
ggcggcagcagcaatttgagaggcagagggcgaggatcctccggacccggcccagctcgc
cggttcccaaaccggtccgcgacccggtccgccccttactccgcaggaaagccggttccg
gcgccggtgttggcgtggcagcatgacatgttcgccgatcaggcggcggcgccccggtca
acggcgatagagacgggcacgaagctgtatatctcgaacctggattacggcgtgtcaaac
gaggatataaaggagctgttttcagaggttggtgacttgaaacgatactcaatccattat
gataggagcggaagatcaaagggaacagcagaagttgtcttttcacggcgggcagatgct
gcagcggctgttaagagatacaacaatgttcagctcgatgggaagccaatgaaaatagag
attgtggggacaaatattataacccctgctcctgtgcctcagattacaggcagcatcttg
ggaaatcctaatgtcattccaagaagttggccggggaggggagtctctatgggcttgcct
cggggcggcggcagcggcggcggcggccgtgatggtcgcggacggggaaggggccgtgga
agggggaggggccgtggtggtgaccaattaacggcagaagatcttgacgccgatttggac
aagtatcatgcaatgcaaatcaactga

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