Magnolia sinica: 131252969
Help
Entry
131252969 CDS
T09699
Name
(RefSeq) THO complex subunit 4A
KO
K12881
THO complex subunit 4
Organism
msin
Magnolia sinica
Pathway
msin03013
Nucleocytoplasmic transport
msin03015
mRNA surveillance pathway
msin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131252969
09122 Translation
03013 Nucleocytoplasmic transport
131252969
03015 mRNA surveillance pathway
131252969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131252969
03041 Spliceosome [BR:
msin03041
]
131252969
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
131252969
TREX complex
131252969
Spliceosome [BR:
msin03041
]
Complex C
Other components
EJC/TREX
131252969
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
131252969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Motif
Other DBs
NCBI-GeneID:
131252969
NCBI-ProteinID:
XP_058109760
LinkDB
All DBs
Position
8:complement(15491765..15504175)
Genome browser
AA seq
248 aa
AA seq
DB search
MSSALDMSLDDLIKNNKKSSGGSSNLRGRGRGSSGPGPARRFPNRSATRSAPYSAGKPVP
APVLAWQHDMFADQAAAPRSTAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHY
DRSGRSKGTAEVVFSRRADAAAAVKRYNNVQLDGKPMKIEIVGTNIITPAPVPQITGSIL
GNPNVIPRSWPGRGVSMGLPRGGGSGGGGRDGRGRGRGRGRGRGRGGDQLTAEDLDADLD
KYHAMQIN
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgccttggacatgtccctcgacgatctgataaaaaacaacaagaaatcgtca
ggcggcagcagcaatttgagaggcagagggcgaggatcctccggacccggcccagctcgc
cggttcccaaaccggtccgcgacccggtccgccccttactccgcaggaaagccggttccg
gcgccggtgttggcgtggcagcatgacatgttcgccgatcaggcggcggcgccccggtca
acggcgatagagacgggcacgaagctgtatatctcgaacctggattacggcgtgtcaaac
gaggatataaaggagctgttttcagaggttggtgacttgaaacgatactcaatccattat
gataggagcggaagatcaaagggaacagcagaagttgtcttttcacggcgggcagatgct
gcagcggctgttaagagatacaacaatgttcagctcgatgggaagccaatgaaaatagag
attgtggggacaaatattataacccctgctcctgtgcctcagattacaggcagcatcttg
ggaaatcctaatgtcattccaagaagttggccggggaggggagtctctatgggcttgcct
cggggcggcggcagcggcggcggcggccgtgatggtcgcggacggggaaggggccgtgga
agggggaggggccgtggtggtgaccaattaacggcagaagatcttgacgccgatttggac
aagtatcatgcaatgcaaatcaactga
DBGET
integrated database retrieval system