Magnolia sinica: 131253044
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Entry
131253044 CDS
T09699
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msin
Magnolia sinica
Pathway
msin00040
Pentose and glucuronate interconversions
msin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131253044
Enzymes [BR:
msin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131253044
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
CCAP
Motif
Other DBs
NCBI-GeneID:
131253044
NCBI-ProteinID:
XP_058109850
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Position
8:complement(20508786..20533071)
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AA seq
239 aa
AA seq
DB search
MGNGLRLKECEHVIVCNLEFEGGRGHDVDGIQIRTKSRHIWIDRCSLCGYDDGLIDITRE
STDITVSRCHFAQHDKTMLIGADPTHTGDRWMRVTIHHCFFDGTMQRHPRVRFAKVHLYN
NYTRNWGIYAVCASVESQILSQCKIYEAGKKKEVFRYKTEKAADCEEAASGWVRSEGDLF
LNGSQPCLVTGPGVDSVFKASECCSTLTMEAPSVGLKEVLQICTGWQAIPRPPEIASTA
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacggtttacggctgaaggaatgtgaacatgtcattgtatgcaacctggaattt
gaaggtggtagaggacatgatgttgatggcattcaaataaggaccaagtcaaggcacata
tggatagaccgttgcagcctgtgtggttacgatgatggactgattgatattacacgagaa
agcacagacattactgtttcaagatgtcactttgcacagcatgataaaacgatgcttatt
ggagcagatcctacacacactggagacagatggatgagggtgacgattcatcattgtttt
tttgacgggactatgcagcggcatcctcgtgttagatttgcaaaagttcatttatacaac
aattacacaaggaattggggtatatatgctgtgtgtgccagtgtagaatctcagattctt
tctcagtgtaaaatatatgaagctgggaagaagaaggaggtatttagatataagacagag
aaggcagctgattgtgaagaggctgcatctgggtgggtaaggtctgaaggtgatctgttc
ctaaacggttctcaaccttgtttagtcaccgggcctggcgtggattctgtgtttaaggca
agcgaatgctgctcgacattgactatggaagctccgtcggtgggtctgaaagaggttctc
caaatttgtacaggatggcaggcgataccgaggccaccggagattgcttcaacagcgtaa
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