Magnolia sinica: 131253045
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Entry
131253045 CDS
T09699
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msin
Magnolia sinica
Pathway
msin00040
Pentose and glucuronate interconversions
msin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131253045
Enzymes [BR:
msin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131253045
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131253045
NCBI-ProteinID:
XP_058109851
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Position
8:complement(20768768..20777713)
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AA seq
391 aa
AA seq
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MGICYGCFSSNPSHKPHNSTNSSSLPSVTTPPTTYVPPPLGPNSSYIPSTTPITTATTTT
MARLPYGHVDNSLRALAGQAEGFGRSAIGGLHGSIYHVTSLADDGNGSLRAGCRIQEPLW
IVFEVSGTIHLNSYLNVSSYKTIDGRGQRIKLMGKGLRLKECEHVIVCNLEFEGGRGHDV
DGIQIKPKSRHIWIDRCSLCDYDDGLIDITRESTDITVSRCHFAQHDKTMLIGADPTHTG
DRCMRVTIHHCFFDGTRQRHPRVRFAKVHLYNNYTRNWGIYAVCASVESQILSQCNIYEA
GKKKEVFRYMTEKAADCEEAASGWVRSEGDLFLNGSQPCLVTGPGVDSVFKASECCSTLT
MEAPSVGLKEVLQICTGWQAIPRPPENVSTA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgggtatttgttacggctgtttctcttcaaatccttcccataaaccccataacagcact
aacagctcttctctaccgtccgttacaacgccccctactacttatgtccctccacccctc
ggtcccaattcctcctacattccctcaacgacaccgataacgacagcaactaccacaacg
atggcccgattgccttacggccacgtcgacaacagcttgcgggccctcgccgggcaggct
gagggtttcggccgctccgccatcggaggccttcatggatccatctaccacgtcacctct
ttagctgatgatggaaatggatcacttcgtgctgggtgtcgtatacaagaaccactttgg
atagtttttgaagtttctggcaccattcatctcaattcttacttaaatgtatcatcttat
aagacaatcgatggccgtggccagaggataaaactgatgggcaagggtttacgtctgaag
gaatgtgaacatgtcattgtatgcaacctggaatttgaaggtggtagaggacatgatgtt
gatggcattcaaataaagcccaagtcaaggcacatatggatagaccgttgcagcctgtgt
gattacgatgatggactgattgatattacacgagaaagcacagacattactgtttcaaga
tgtcactttgcacagcatgataaaacgatgcttattggagcagatcctacacacactgga
gacagatgcatgagggtgacgattcatcattgcttttttgacgggactaggcaacggcat
cctcgtgttagatttgcaaaagttcatttatacaacaattacacaaggaattggggtata
tatgctgtgtgtgccagcgtagaatctcagattctttctcagtgtaatatatatgaagct
gggaagaagaaggaggtatttaggtatatgacagagaaggcagctgattgtgaagaggct
gcatctgggtgggtaaggtctgaaggtgatctgttcctaaacggttctcaaccttgttta
gtcaccgggcctggcgtggattctgtgtttaaggcaagcgaatgctgctcgacattgact
atggaagctccgtcggtgggtctgaaagaggttctccaaatttgtacaggatggcaggcg
ataccgaggccaccggagaatgtttcaacagcgtaa
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