Magnolia sinica: 131253046
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Entry
131253046 CDS
T09699
Name
(RefSeq) probable pectate lyase 4 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msin
Magnolia sinica
Pathway
msin00040
Pentose and glucuronate interconversions
msin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131253046
Enzymes [BR:
msin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131253046
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131253046
NCBI-ProteinID:
XP_058109852
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Position
8:complement(20681429..20707697)
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AA seq
356 aa
AA seq
DB search
MARLPYAHVDNSLRALAGQAEGFGRSAIGGLHGSIYHVTSLAESGLKAQTLGCHQRPDAH
VHAFHVLDDGNGSLRAGCRIQEPLWIVFEVSGTIHLNSYLNVSSYKTIDGRGQRIKLMGN
GLRLKECEHVIVCNLEFEGGRGHDVDGIQIRTKSRHIWIDRCSLCGYDDGLIDITRESTD
ITVSRCHFAQHDKTMLIGADPTHTGDRCMRVTIHHCFFDGTMQRHPRVRFAKVLLYNNYT
RNWGIYAVCASVESQILSQCNIYEAGKKKEVFRYTTEKAADCEEAASGWVRSEGDLFLNG
SQPCLVTGPGVDSVFKASECCSTLTMEAPSVGLKEVLQICTGWQAIPRPPEIASTA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcccgattgccttacgcccacgtcgacaacagcttgcgggccctcgccgggcaggct
gaaggcttcggccgctccgccatcggaggccttcatggatccatctaccacgtcacctct
ttagctgaaagcggtttgaaggcacagacactgggctgccaccagaggccagatgctcat
gtgcatgcattccatgtactagatgatggaaatggatcacttcgtgctgggtgtcgtata
caagaaccactttggatagtttttgaagtgtctggcaccattcatctcaattcctactta
aatgtatcatcttataagacaatcgatggccgtggccagaggataaaactgatgggcaac
ggtttacggctgaaggaatgtgaacatgtcattgtatgcaacctggaatttgaaggtggt
agaggacatgatgttgatggcattcaaataaggaccaagtcaaggcacatatggatagac
cgttgcagcctgtgtggttacgatgatggactgattgatattacacgagaaagcacagac
attactgtttcaagatgtcactttgcacagcatgataaaacgatgcttattggagcagat
cctacacacactggagacagatgcatgagggtgacgattcatcattgtttttttgacggg
actatgcagcggcatcctcgtgttagatttgcaaaagttcttttatacaacaattacaca
aggaattggggtatatatgctgtgtgtgccagcgtagaatctcagattctttctcagtgt
aatatatatgaagctgggaagaagaaggaggtatttagatatacgacagagaaggcagct
gattgtgaagaggctgcatctgggtgggtaaggtctgaaggtgatctgttcctaaacggt
tctcaaccttgtttagtcaccgggcctggcgtggattctgtgtttaaggcaagcgaatgc
tgctcgacattgactatggaagctccgtcggtgggtctgaaagaggttctccaaatttgt
acaggatggcaggcgataccgaggccaccggagattgcttcaacagcgtaa
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