Magnolia sinica: 131253286
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Entry
131253286 CDS
T09699
Name
(RefSeq) U3 snoRNP-associated protein-like EMB2271
KO
K14793
ribosomal RNA-processing protein 9
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msin03009
]
131253286
Ribosome biogenesis [BR:
msin03009
]
Eukaryotic type
90S particles
Other 90S particles
131253286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_SCAP
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_EIPR1
WD40_like
Beta-prop_WDR19_1st
SMC_ScpA
Folliculin
Nop14
Motif
Other DBs
NCBI-GeneID:
131253286
NCBI-ProteinID:
XP_058110218
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Position
8:complement(45399281..45473269)
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AA seq
517 aa
AA seq
DB search
MKKARSRKSPLPEGARRSSKSSRSEDPFFVPDRKRRRKIDDDFIDSDDEEDEIGGTSHAE
GEREGEEEEAAETADEKRLRVANAYLEKIRAITRRAAEEEEEEEEEEDGEREEKRDSLVA
KILQQEQLEDSGRVRRLLASRVQEPKVFDEFHVVAKHRQSVTAVALADDDSKGFSASKDG
TILHWDVVSGKGEKYSWPNKDILNLHGAKDPKNPSKKLSKHVLALAVSSDGRYLATGGLD
RHVHLWDTRTREHIRAFPGHRGPVSCLTFRQGSSLLISGSFDRTIMLWDAEDRAFLQPLF
GHQSEVLTIDCLRKERLLTVGRDRTMRLWKVPEESQLVFRAPTASLECCRFINNEEFLTG
SDDGSIELWSVMRKKPTCIVKNAHAASAPQNQSDAKDNGSISNGDELENGHEISESHCSS
AKSWVSSVTVCRGTDLAASGAGNGVVRLWAVENDANNIRWLYDLPLAGFVNSLVFARSGR
FIVAGVGQEPRLGRWGRISSARNGVAVHSLALSEEGV
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggccagaagccgcaaaagccctctccccgaaggcgctcgcagaagctctaaa
tcgtcccgttcggaagaccctttcttcgtacccgatcggaagcgacgccggaagatcgac
gatgatttcatcgatagcgacgatgaagaagatgagattggcggcacatctcatgcagaa
ggagaaagggaaggggaggaagaagaagcggcagagactgcagacgagaagcggctgaga
gtcgcgaatgcgtatttggagaagatccgtgcgatcacgaggcgggcagcggaagaggaa
gaagaagaagaagaggaagaagatggggagagagaagagaagagagattcgttggtggcg
aagattctgcagcaggagcagttggaagatagcgggcgagttcggagattgcttgcttcc
agggtccaagagccaaaggtgtttgatgaatttcatgtcgttgcaaagcatagacagtct
gttacagctgtagctttggccgatgatgattctaaagggttttcagcttccaaggatgga
actattcttcattgggatgtagttagcgggaaaggtgaaaagtattcgtggccaaacaag
gacatattaaacttgcatggtgcaaaggatccaaaaaatccatctaaaaagttgagcaaa
catgtattagcactggctgttagctcagatggtcggtatttagcaacggggggcttagat
cgtcatgttcatttatgggatactcggacacgtgagcatattcgggcatttcctggtcac
agaggacctgtgtcttgtctgacatttaggcagggtagttcactgcttatatctggttct
tttgatcgaacaatcatgttatgggatgcggaagatagagctttcttgcagccattattt
ggtcaccaaagtgaagttttaacaatagattgtttgaggaaagagcggctattgactgtt
ggccgtgatcggactatgcgcttgtggaaggttcctgaggaatcacagttagtttttagg
gctcccacagcatctttggagtgttgccgttttatcaacaatgaagagttcttaactgga
tcagacgatggcagtattgagctttggagcgtgatgcgtaagaagcctacatgcattgta
aaaaatgcacacgccgcatcagcccctcagaatcagtcagatgcaaaagataatggaagc
atctctaacggagatgagttagaaaatggtcacgaaatctctgaaagccattgttcatca
gcgaagtcatgggttagttcagttactgtgtgtagaggtactgatcttgctgcttctgga
gctggtaatggtgtggttcggttatgggctgttgaaaatgatgccaacaatattcggtgg
ttgtatgatctcccactggctgggtttgtaaattcccttgtgtttgcgagatccgggcgc
ttcattgtagctggagttggacaggagccacgcctaggaagatggggacggatttcgtct
gctcggaatggagttgctgtgcattcccttgctctttcagaagagggtgtatga
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