Magnolia sinica: 131253346
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Entry
131253346 CDS
T09699
Name
(RefSeq) clathrin heavy chain 2
KO
K04646
clathrin heavy chain
Organism
msin
Magnolia sinica
Pathway
msin04142
Lysosome
msin04144
Endocytosis
msin05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131253346
04142 Lysosome
131253346
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
131253346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131253346
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msin04147
]
131253346
Membrane trafficking [BR:
msin04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
131253346
Exosome [BR:
msin04147
]
Exosomal proteins
Proteins found in most exosomes
131253346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
IcmW
Motif
Other DBs
NCBI-GeneID:
131253346
NCBI-ProteinID:
XP_058110298
LinkDB
All DBs
Position
8:58050428..58085633
Genome browser
AA seq
1703 aa
AA seq
DB search
MAAANAPITMKEALTLTSLGINPQFITFTHVTMESEKYICVRETAPQNSVVIIDMSMPMQ
PLRRPITADSALMNPNTRILALKAQLPGTTQDHLQIFNIEMKAKMKSHQMPEQVAFWKWI
TPKMLGLVTQTSVYHWSIEGDSEPVKVFDRTANLTNNQIINYRCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLFSVDQQRSQALEAHAASFASFKVAGNENPSTLICFASKTTNAGQITS
KLHVIELGAQPGKPGFTKKQADLFFPPDFADDFPVAMQISNKYSLIYVITKLGLLFVYDL
ETTTAVYRNRISPDAIFLTAEASSVGGFYAVNRRGQVLLATVNEVTLVPFVSGQLNNLEL
AINLAKRGNLPGAENLVVQRFQELFSQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHAYLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIGQLCEKAGLYVRALQHYTELPDIKRVIVNTHAI
EPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQTAKEYSEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDPEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYSNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDEELINVTNKNSLFKLQARY
VVERMDSDLWEKVLSPDNEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSIERAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLDVIRCAEDANVYHDLVRYLLMVRQKTKEPKVDSELIYAYAKIDRLGDI
EEFILMPNVANLQNVGDRLYDEALYEAAKIIYAFISNWAKLAVTLVKLKQFQGAVDAARK
ANNSKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSDYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRSEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAASTIMNHSPEAWDHMQFKDVAVKVANVELSYKAVHFYLQEHPDLINDLLNVL
ALRVDHTRVVDIMRKAGHLHIVKPYMVAVQSNNVSAVNEALNEIYIEEEDYDRLRESIDM
HDNFDQIGLAQKIEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNHYRDAMETCSQSGD
RELSEELLVYFIEQGKKECFASCLFTCYDLIRPDVALELAWMNNMVDFAFPYLLQFLREY
TSKVDELVKDKIDSLSEVRAKEKEEKDIAAQQNMYAQLLPLALPAPPMPSMGGGYGGPPP
MGSMGMPPMPPFGMPPMPQMGGY
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgccaacgctccgatcacgatgaaagaggccctgacgttgacaagtctcgga
ataaacccgcaattcatcacgttcacgcatgttacaatggaatctgaaaagtacatatgc
gtccgagaaactgcgccccagaatagtgtcgtgatcattgatatgagcatgccgatgcag
ccgttgagaaggccaatcactgcagactccgctttgatgaatcccaatacccgaattctt
gctctgaaagctcaacttccgggaaccactcaggaccaccttcaaatattcaacattgag
atgaaagcaaaaatgaaatcgcatcagatgcctgagcaggttgccttttggaagtggatt
acccccaagatgttgggtttggtgacacaaacctctgtgtatcattggtcaattgaaggt
gactcggagcctgtaaaggtgtttgatagaacagctaatttgacaaacaatcaaataatt
aactatcgatgtgatccctctgagaagtggttggttctgatcggaattgctccgggctca
cctgagaggccacaactggtcaaaggaaacatgcagcttttttctgtggatcagcagcgt
agtcaagctcttgaagctcatgctgcatcatttgcatcatttaaagttgctggaaatgaa
aacccttcgactcttatttgctttgcatcaaagactaccaatgcaggacagattacatcg
aagttacatgtgattgaacttggtgcccaaccaggtaagcctggttttacaaagaaacaa
gcagatcttttcttccctccggactttgctgatgatttcccagtggcaatgcagatatcc
aataagtacagcctgatatatgtgatcacaaagcttgggcttctatttgtgtatgacttg
gagaccactacagcagtttacagaaatcgaatcagtccagatgctatatttttgacagca
gaagcttcatctgtaggaggcttctatgctgtcaataggcgagggcaagtgttacttgca
actgtcaacgaagtgacacttgtgcctttcgttagtggccaattaaacaatctggagctt
gctattaatcttgccaaaagaggaaaccttccgggggctgagaatttggttgtccagcgg
ttccaagaattattctctcagacaaaatacaaggaggctgcagagctggcagcagaatct
ccacagggcatcctccgtactcccgacactgttgccaaatttcagagtgttcctgtgcaa
gctggacaaacaccaccattgttgcagtactttgggacattgttaaccaggggaaaactc
aatgctttcgagtccttggaattatctcgcctggttgtgaatcagaataaaaagaatctt
ttggagaattggttggctgaggacaagcttgagtgcagcgaagaacttggggatcttgtg
aagaccgtggacaatgaccttgctctgaaaatatatatcaaagcaagggctactccaaaa
gttgttgcagcttttgctgaacgaagggaattcgataaaattctaatttactcgaagcag
gttggatacacacctgattatcttttccttctgcaaacaattctgcgctctgatccccag
ggagcagttaattttgctctcatgatgtcacaaatggagggaggttgtcctgtcgactac
aacactatcacagatctcttccttcagaggaacatgatacgagaggcaacggccttctta
ttagatgttttgaagccaaatttaccagaacatgcttacctccaaaccaaggtcttggag
ataaatcttgtgacatttccaaacgtagcagatgctatcttagctaatggaatgtttagt
cactatgaccgtcctcgcatcgggcagctatgtgaaaaagctggcttgtatgtgcgtgcc
cttcagcattacactgagttgcctgatattaagcgtgtgattgtgaacactcatgccatt
gagccacagtcactcgtggagttttttgggaccctttcccgagaatgggcactagaatgc
atgaaagaccttttgctggttaatctgagaggaaatcttcagataattgtgcagactgcc
aaagaatattctgagcagttgggtgtggatgcttgcataaaactctttgaacagttcaag
tcatatgagggactatacttcttcttgggatcatatctgagctctagtgaagatccagat
atacacttcaagtacattgaggcagctgctaaaactggacagataaaagaggttgagcga
gtgacgagagaatcaaacttctatgaccctgagaagacaaagaactttctaatggaagcc
aagctccctgatgcacgacccctcataaatgtttgtgaccgttttggttttgttccggat
cttacacactacttgtactcaaacaacatgcttcgatatattgaaggctatgtgcagaaa
gtgaacccaggaaatgcacctctagttgtggggcagttgctagatgatgagtgtcctgaa
gatttcatcaaaggcctcattctttctgtccgttctctccttccagtggagccccttgtg
gatgaatgtgagaagaggaatcgacttcgtttgctcacacagtttttagagcatctcgtc
agtgagggtagccaagatgtccatgttcacaatgctctgggtaaaataatcattgacagc
aacaacaatccagagcattttctcaccactaacccttactatgattcacgtgttgtgggt
aaatactgcgagaaacgggaccctacacttgcagtcgttgcttaccggagaggacagtgt
gatgaagagcttatcaatgtcacaaataaaaactctctgtttaaactgcaggccagatat
gttgtggagaggatggattcagacctgtgggaaaaagttcttagccctgataatgaatat
agaagacagcttattgatcaagttgtgtctactgccttgcctgaaagcaagagccctgag
caagtttctgcagctgttaaagctttcatgactgctgatcttccacacgaacttattgag
cttcttgagaagattgtgcttcaaaattctgccttcagtgggaacttcaatctgcaaaac
ctgctgatactaacagctatcaaggcagatccttcaagggtcatggactacataaatagg
ctcgataactttgatggacctgcagtcggggaggtagctgtagaagcccaactgtatgaa
gaagcctttgccatcttcaaaaagttcaacttgaatgtacaggcagtgaatgtcctgttg
gataacattcgaagcatagaacgagcagtggagtttgcattccgtgttgaagaggatgct
gtttggagccaggtggcaaaggcccaactcagggagggcctagttagcgatgccattgag
tcctttattcgtgcagatgatgccactcagttcttagatgtcattcggtgtgccgaggat
gcgaatgtataccatgacttggtgaggtacttattgatggttcggcagaaaaccaaagag
cccaaagtggacagcgagctcatctatgcatacgcgaagatcgataggctgggcgatatt
gaagaattcattcttatgccaaatgttgctaatcttcaaaatgttggggatcgcctgtac
gatgaagccctgtatgaggctgcaaagatcatatatgcatttatatccaactgggcgaag
ctggctgttactcttgtgaagttgaagcaattccagggtgcggttgatgcagctcggaag
gcgaacaactcaaagacgtggaaggaagtatgttttgcctgtgttgatgctgaggagttc
cgtcttgcacagatatgtggtctcaacatcattatacaggtggatgatttggaggaggtt
agtgattactatcagaatagaggatgcttcaatgagctgatctctctcatggagagtggg
cttgggctggaacgtgcacacatggggatctttacagagttgggcgtcttgtatgctaga
taccgttcagagaaacttatggagcacatcaaactattctcaacccgtctcaacatcccc
aagcttatacgagcttgtgatgagcaacaacactggaaggagcttacctatctgtacatc
cagtacgatgagtttgacaatgctgcaagtacaatcatgaaccattctccggaggcgtgg
gaccacatgcagttcaaagatgttgcagtgaaggttgcaaatgtcgagctttcctacaaa
gcagtgcacttctacttgcaggaacatcccgacctcatcaatgatcttctcaatgttctt
gcacttcgtgtggaccatacccgtgtggtagacataatgcggaaggctggtcatctccat
attgtgaagccgtacatggttgcagtacaaagcaacaatgtttctgctgtaaatgaggct
ttgaatgaaatctacattgaggaggaagactacgataggctgcgagagtcaatcgatatg
catgataactttgatcagataggacttgcacagaagattgagaaacatgagcttcttgag
atgaggcgcattgcggcttatatttataagaaagcagggagatggaagcaatccattgca
ttgtctaagaaagacaatcattacagagatgccatggagacgtgctcccagtctggtgat
cgtgagctttctgaggagttgctcgtttatttcattgaacagggaaagaaggaatgcttt
gcttcatgccttttcacttgttacgatttgatccggccagatgttgctctcgaattggcc
tggatgaacaatatggtcgactttgctttcccatacctcctgcagtttctccgcgagtac
acaagcaaagtggatgaacttgtgaaagacaagatcgattcactcagtgaagtgagagct
aaagagaaggaagagaaggacatagctgcccagcagaatatgtatgcacagttgctccct
cttgctttgcccgcaccgcccatgccgagtatgggaggtggttatgggggcccaccaccc
atgggcagtatggggatgcctccaatgccaccatttggcatgcctccaatgccccagatg
ggaggttactga
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integrated database retrieval system