Magnolia sinica: 131254026
Help
Entry
131254026 CDS
T09699
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
msin
Magnolia sinica
Pathway
msin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131254026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131254026
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131254026
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
131254026
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Cas_TM1802
Motif
Other DBs
NCBI-GeneID:
131254026
NCBI-ProteinID:
XP_058111059
LinkDB
All DBs
Position
8:65099844..65100908
Genome browser
AA seq
282 aa
AA seq
DB search
MLPSRPSCVYRKPIRIRNVDSLNVESEFRIISGFLKDYPFISMDTEFPGVVYHNVPDTPD
SVARDRYALLRANINALKLIQVGLTFSDSASNLPDLGTNYCYVWQFNFNFDPWCDLHAPE
SIELLHKNGIDFERNRFYGIDEARFGFLMKLCGLVGNNCFSWITFHSAYDFGYLIKVVTQ
RELPDDIGEFLKLMKDIFGYKVYDIKYLMRFCHNLYGGLERVANELGVDRAVGKCHQAAS
DSLLTLHVFTRLKDRGFQLYVPDHCGVLYGLKYPLGNLFSLN
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgctaccatcaagacctagttgtgtctacagaaaaccaattcgtatcagaaatgtggat
tcgttgaacgtggagtctgagttccgcataatcagcggcttcctcaaagactaccctttc
atctctatggacactgagttccctggtgtcgtctaccataacgtgcccgatacacccgac
tctgtagccagggatcgatacgcactccttcgggcgaatataaacgccctcaagctcatc
caagtcggactcactttctccgactcagccagcaaccttcctgatttggggaccaactac
tgttacgtctggcaatttaatttcaacttcgatccatggtgtgacctccacgcacccgaa
tcgatcgaactattgcataagaacggcattgacttcgagcgcaatcgattctacgggatt
gatgaggcccgtttcgggttcctcatgaagctatgcggacttgttgggaacaattgtttt
agttggatcaccttccacagtgcttacgactttggctatctgataaaggtggtcactcag
agggagctaccggatgacattggcgagtttctcaaattgatgaaagatatatttgggtac
aaggtttatgacataaaatatctcatgaggttctgtcacaacttatatggagggttggaa
cgtgtggccaatgaattgggggtggacagggctgttgggaaatgccaccaagctgcatca
gatagcctgctaacattgcatgtttttacgcggctcaaggatagaggttttcagctgtat
gtgcctgaccactgtggagtattgtatggattaaaataccctttgggaaatctgttttca
ttgaattga
DBGET
integrated database retrieval system
