Magnolia sinica: 131254134
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Entry
131254134 CDS
T09699
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
msin
Magnolia sinica
Pathway
msin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
131254134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msin03400
]
131254134
DNA repair and recombination proteins [BR:
msin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
131254134
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
DUF3347
AAA_29
Motif
Other DBs
NCBI-GeneID:
131254134
NCBI-ProteinID:
XP_058111124
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Position
1:complement(111516917..111612178)
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AA seq
1108 aa
AA seq
DB search
MQRQKSILSFLQKPSSENPSSGSSSYTEILQRRRLAQFLPKQLKQNPSIAAESVAPTASD
LPPEVLGTETPPEKPRGRVLPSRCSADGDAGARTLSSIMQKLSKEDEHESSPDRNQHKGA
FVSYSYSNKLDDSQGLQKQRTSFQHLSKDNVSIVDGSYDQVSSLNIESIPDVLEPETPAM
RPLVPRLKRIQEDAHNFGDKRDTYFLDSSKRMKLLQDSGTKNKINGVVCETTGSKFEWLD
PSLIRDAAGRRPGDALYNKRTLYIPPDALKKMSASQKQYWTVKCQYMDVVLFFKVGKFYE
LYELDAEIGHKELDWKMTNSGVGKCRQVGISESGIDDAVQKLIARGYKVGRMEQIETSDK
AKARGATAVIQRKLVHVFTPSTTTEWNMGPDAVHLLALKEGHCDLENRSTEYGFAFLDYA
ALKFWVGSMCNDASCATLGALLMQVSPKELVYESKGLSSEAHKALKKYASAGSALQLSPV
LPGTVFADASEVRKLIESKGYFKGSSDSRASGLDSVMVSDLAICALGGLVDHLSRLMLDD
ALRNGEILPYQVYSSCLRMDGQTLVNLEIFSNNVDGAASGTLYRHLDSCITSAGKRLLRN
WICHPLKNIGEINDRLNVVEGLMKQSEITFIIAQYLRRLPDLERLLGRVKASVGSSAVLS
LPLIGEKVLKQQVKAFGTLVKGLRIGMELLVILQKEDYGISSLSKVLNLPLLSELDDVLT
QFETAVDDSFPQYQEHDIKDSDAETLSILVELFVEKSSQWTQIIHALSRVDVLRSFAVIA
NSSRGCMCRPVLVPPNSTSVLSIQETGGSILKVKGLWHPYAIGENGGDPVPNDIYLGEGT
AGYCPRTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYVPCEMCVLSPVDIVFTRLGATDR
IMTGESTFFIECSETASILQNATQDSLVLLDELGRGTSTFDGYAIAYAVFRHLIEKVQCR
LLFATHYHPLTKEFASHPHVSLQHMACAFNQRNGSSSMGNQELVFLYKLTSGACPESYGL
QVALMAGIPKWVVEAASKASGAMRRSIGENFKSSEGRSEFSTLHEEWLKTILAVSRINGC
DLDEDDSDTLLLLWHELKNCYRLLKGKE
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgacagaaatccatactctccttcttacaaaaaccctcatctgaaaaccctagc
tccggctcctcttcctatactgagattctccaacgccgccgcctggcgcagtttctgccg
aagcagctgaagcagaacccttccattgcagcggaatccgttgctccgactgcaagcgac
ctcccgccggaggtcttggggacggagactccgccagaaaagccccggggtcgggttctc
ccatcgagatgttcagcagatggcgatgctggagctcggaccctctcgagcataatgcag
aaactatcaaaggaggacgaacatgaaagctctcctgatcggaaccaacataaaggtgct
ttcgttagttattcatactcaaacaagctagatgatagtcaaggattacagaaacagaga
acatcctttcaacatctctcaaaggacaatgtttctatagttgatggtagttacgatcaa
gtgagttccttaaatattgaaagtatccctgatgtgttggagccagaaacacctgctatg
cggcctcttgttccccgcttgaagaggattcaagaggatgctcataactttggtgataag
cgtgatacttattttctggattcgagtaaaagaatgaagctactgcaagattcagggaca
aaaaacaagatcaatggtgtagtatgtgaaacaacgggcagtaagtttgaatggctcgac
ccttcattgattagagatgctgctggaagaaggccgggtgacgccctctacaacaagaga
accctctacataccacctgatgctttaaagaaaatgtcagcatctcaaaaacagtattgg
actgtaaaatgtcagtatatggatgtggtcctcttctttaaagtgggcaaattctatgag
ctctatgagttagatgctgagattggtcataaagagctcgattggaaaatgacgaatagt
ggtgttggtaaatgtagacaggttggtatttctgagagtggaattgatgatgctgttcaa
aagctaatagctcgtgggtacaaagttggacggatggaacagatcgagacatccgataaa
gccaaagctagaggggcaactgctgtgattcaaaggaaattggttcatgtattcacgcca
tcaactacaaccgaatggaatatggggcctgatgctgttcatcttcttgctttgaaagag
gggcattgtgacctggaaaatcgctcaactgaatacgggtttgcttttttggactacgct
gctttaaaattttgggttggttctatgtgtaatgatgcttcttgcgccactttgggggct
ttgttgatgcaagtttcaccgaaagaattggtgtacgaaagcaaagggctttctagtgaa
gctcacaaggcactcaaaaagtatgcttcagcaggttctgcattgcaattgagtcctgtg
ctaccaggcacagtttttgcagatgcttcagaagttagaaaactaatagagtctaaagga
tattttaaagggtcttctgattctcgggcttctggacttgatagtgttatggttagtgat
cttgccatatgtgctctcggtggacttgtcgatcatttatctaggttgatgctagatgat
gcattacgtaatggagaaattttgccttatcaagtgtattcaagctgcctaaggatggat
ggccagactcttgtaaatcttgagattttcagcaataatgttgatggtgctgcatctggt
acactatacagacatcttgatagttgtatcacttcggctgggaagcggcttttaagaaac
tggatctgccatccactgaagaatattggagaaatcaatgataggcttaatgtggtagag
ggattaatgaagcagtccgaaataacattcatcatagcacagtatctacggagacttcct
gatcttgaaagactgctgggacgagttaaggccagcgttgggtcctcagctgtactttca
ttgcccttaattggagaaaaagtattgaagcagcaggtgaaagcatttggcactcttgtt
aaagggcttcggattggtatggaattgctagtaattttacagaaagaagattatggaatc
tcgtcactatcaaaagttttgaatcttccattgcttagtgagcttgatgatgttctcaca
caatttgaaactgctgtggatgatagcttcccccaataccaggagcatgatataaaagat
tcagatgctgaaacactatccattcttgttgagttgtttgtcgaaaaaagttctcaatgg
actcaaatcatccatgccctcagccgtgttgatgtgctacgatcttttgcagtcattgca
aattcttctcgtgggtgtatgtgcaggcctgttctcgtgcctcctaattccacttccgtg
ctttcaatccaagaaactggaggatcgatacttaaggtcaagggcctatggcatccatat
gctattggagagaatgggggcgatcctgtcccaaatgacatatatcttggtgaaggtaca
gcaggctactgccctcgaacgttgctgctgactggaccaaatatgggtggaaaatcaacc
cttctgcgtgcaacatgtctggctgttattatggcccagttgggctgttatgttccttgt
gaaatgtgtgttctatcacctgtggatattgtcttcacaaggcttggtgcaactgatcga
atcatgacgggcgagagtaccttttttattgaatgctcggaaacagcatcaattcttcaa
aatgccactcaagattctctagttctgcttgatgaactcggccgaggaacaagcacattt
gatggatatgcaattgcctatgcagtattccgccatctcatcgaaaaagtccaatgccgt
cttctgttcgccactcactatcaccccctcacaaaggagtttgcttctcaccctcatgtg
agccttcaacatatggcctgtgctttcaatcagagaaatggaagctcctctatgggcaac
caggagctggttttcctctacaagctcacttcaggagcatgtccagagagctatgggctg
caagttgcactcatggccgggatcccgaagtgggtggttgaagctgcatcaaaagctagt
ggagcaatgagaaggtctattggagagaatttcaagtcgagtgaagggaggtcggagttt
tcaactctccacgaggaatggctgaagactatattggccgtttctaggatcaacggatgc
gatctggacgaggatgattccgatacgctgcttctcttgtggcatgagctgaagaactgt
tacagattactcaagggaaaggaatag
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