Magnolia sinica: 131255409
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Entry
131255409 CDS
T09699
Name
(RefSeq) pleiotropic drug resistance protein TUR2-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
msin
Magnolia sinica
Pathway
msin02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131255409
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msin02000
]
131255409
Transporters [BR:
msin02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
131255409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA
AAA_22
AAA_25
RsgA_GTPase
AAA_18
AAA_30
AAA_23
nSTAND3
AAA_33
AAA_28
NTPase_1
NACHT
RuvB_N
AAA_5
cobW
AAA_11
AAA_19
AAA_17
T2SSE
DO-GTPase1
Motif
Other DBs
NCBI-GeneID:
131255409
NCBI-ProteinID:
XP_058112102
LinkDB
All DBs
Position
1:complement(117492320..117513752)
Genome browser
AA seq
1444 aa
AA seq
DB search
MDNTDLYRVGSLRRNGSSMWRNTTVDNVFSQSSREEDDEEALKWAALEKLPTYDRIRKGI
LSGVAGEEHKEVDIQHLGFQDKKTVLERLVRVAEEDNEKFLLKLKNRIDRVGIEVPTIEV
RYENLNIGAEAYVGSRGLPTVLNFTFNILEGFLNYLHILPSRKKPVSILHDVSGIIKPCR
MTLLLGPPGSGKTTLLLALAGKLDKELKVSGRVTYNGHGMEEFVPQRTSAYISQHDLHIG
EMTVRETLAFSARCQGVGTRYEMLMELSRREKAANIKPDPDLDIFMKAASLEGQKESVVT
DYILKILGLEVCADTMVGDEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTT
FQIVNSLRQSIHILGGTALIALHQPAPETYDLFDDIVLLSDGQVVYQGPRENVLEFFESM
GFKCPERKGVADFLQEVTSRKDQQQYWTRRGEPYRYVPVKELTDAFQSFHVGCKIGEELS
TPFDKSKSHPAALTMSEYGISKKELLKACVSRELLLMKRNSFVYIFKMMQLLVIALITMM
VFFRTKMHHNSISDGSTFMGSLFFTLITLMFNGFSELAMTIAKLPVFYKQRDLRFYPSWA
YSLPTWILKIPISFAEVAIWIALTYYVIGFDPNAGRMFKQYLVLLLVSQMASGLFRLTAA
LGRNLIVANTFGAFAVLAIFTLGGFIVSRKDVKKWWIWGYWSSPLMYAQNAIAVNEFLGH
SWKHVVSGSTEMLGIQVLESHRIFPESKWYWIGASALFGYTLLFNGLFTAALTNLDPYKG
GQAVLSEEALKEKHANRTGEVEKVELSTRRTSSSACIGNEIRMTEATNCASKSNKRGMVL
PFAPLSITFDNVRYSIDMPQEMKAQGFPEDRLELLKGVSGTFRPGVLTALMGVSGAGKTT
LMDVLAGRKTGGYIEGNITISGYPKKQKTFTRISGYCEQNDIHSPHVTVYESLIYSAWLR
LPTEVDSATRKMFIEEVMELVELTSLRESLVGLPGVNGLSTEQRKRLTIAVELVANPSII
FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGEEIY
VGPLGHHSSQLINYFEGINGVRKIKDGYNPATWMLEVSSIAQEGILGVNFSEIYKNSDLF
RRNKALIAEMNSPPPGSTDLYFPSQYSQPFITQCIACLWKQQMSYWRNPPYTAVRLLFTT
GIALLLGSIFWDLGSKMTSPQDLLNALGSMYAAVLFLGVQNASTVQPVVAIERTVFYRER
AAGMYSGLPYAFAQVVVEIPYIFVQSVTYGVIIYAMIQFEWTAAKFFWYLFFMFFTLLYF
TCYGMMAVGLTPNQNIAAIVSSAFYALWNLFAGFIVPRPRIPIWWRWYYWACPVAWTLYG
LVASQFGDISKRMDNDMIVSEFVRQNFGVKHDFLGVIAAGIIGYAVLFAFVFAFSIKVLN
FQRR
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggacaataccgacctttatagagtgggaagtttgcggcgcaatggctcttcgatgtgg
aggaacaccacggttgataacgtcttctcgcagtcttctcgtgaggaagatgacgaagaa
gctctcaagtgggccgctctcgagaagcttccgacgtacgatcgaattaggaaagggata
ctgagtggagtcgctggtgaggagcacaaggaagtcgacattcagcatctcgggtttcaa
gacaagaagaccgtgttggagagattggttagagtcgccgaggaggacaatgagaagttc
ctgttgaagctgaagaaccgaatcgatagagttggaattgaggtgccaaccattgaagtc
cgctacgagaatttgaatattggagcagaagcctacgtcggtagcagaggtttaccgacc
gtcctcaatttcacctttaatatactcgagggattcttgaattatctccacattcttccg
agccgaaagaaaccagtatcaatccttcatgatgttagtggaattataaagccttgcaga
atgactctgcttttagggcctccaggatcagggaagaccactttgctattagctttggca
ggaaagcttgataaagaactgaaggtttctggaagagtgacttacaatggccatgggatg
gaggagttcgtccctcaaaggacatcggcttatatcagtcaacacgatcttcatattggg
gaaatgacagtgagagagaccttggctttctctgctcgatgccaaggagtcgggacccgt
tacgagatgttgatggagttgtcaagaagggaaaaagcagcaaacattaagccggatccc
gaccttgacatcttcatgaaggctgcatcgcttgaagggcagaaggaaagtgtcgtcacg
gattatattctgaagattttgggactggaagtatgtgctgataccatggtaggggatgaa
atgcggaggggcatatcaggaggacaaaagaaacgcgttacgacaggtgagatgcttgtc
ggacctgcgaaggcccttttcatggatgagatatcgactggtctggacagctctaccact
ttccagattgtgaattccctgagacagtcaattcacattcttggtgggacagcactgatt
gcactgcatcagccagctccggagacttatgacctcttcgatgacattgttctcctctct
gacgggcaggtcgtgtatcaaggtccccgtgagaatgtgctcgagttctttgaatccatg
ggtttcaaatgccccgagaggaaaggcgtcgccgacttcttgcaggaagtgacatcaaga
aaagatcagcagcagtactggacacgtagaggtgaaccatacagatacgttcccgtcaag
gaattaactgatgcattccaatcattccatgtcggttgtaaaataggagaagaactcagc
accccgtttgataagagcaagagccatcctgctgctttgacgatgtctgaatatggtatc
agcaagaaggaattgctgaaagcatgtgtttcaagggaattgttgcttatgaagaggaac
tcattcgtctacatcttcaaaatgatgcaactgttagtcatcgctttaatcactatgatg
gtcttcttccgtaccaaaatgcaccacaattcgatatccgatggatcaacatttatgggt
tctctctttttcacgctcatcacccttatgtttaatgggttctcagagcttgccatgaca
atcgcaaagcttcctgtgttctacaagcaaagagacctccgcttctatccttcgtgggca
tactctctgcctacatggatcctcaagattcccatttcatttgcagaggtcgctatttgg
attgccctcacttattatgtcatcggcttcgacccaaatgccgggaggatgtttaaacag
tatctggtactcctattagttagccagatggcatctggattgtttcggttaactgctgca
ctgggtcggaacttgatcgttgcaaacacatttggggcatttgcagttcttgcaatcttc
acacttggaggattcattgtatcacgaaaggatgtgaagaaatggtggatctggggttac
tggtcctcgcctttgatgtatgctcagaatgcaattgcggtgaatgaatttcttgggcat
agttggaagcatgttgtttctggttcgacggaaatgttagggatccaagtcttggagtct
catagaatctttcctgaatcaaaatggtattggattggtgccagcgcattgtttggatac
actctcctattcaatggccttttcacagctgctctcactaatctcgacccatataagggc
ggtcaagcagttctatctgaagaggccttgaaggagaagcatgcaaacagaactggagaa
gtcgaaaaggtggagctgtcaaccaggagaacaagctcttctgcatgtattggcaacgaa
attagaatgacagaagccaccaattgtgctagtaagagcaataagaggggcatggttctt
ccttttgcacccctttccatcaccttcgataatgttagatattccatagacatgccgcag
gaaatgaaagctcaaggttttccagaagatcgattagagcttctgaagggagtaagtgga
actttcaggccaggagtacttacagctctgatgggtgtcagcggtgctggtaagactacg
ctgatggatgtgttggctggaaggaagacaggtggatacatagaaggaaacatcaccata
tctggctaccccaagaagcaaaaaacattcactcggatatcgggatactgtgaacagaat
gacatccactctcctcatgttacagtctatgaatctctcatttactctgcgtggcttcgg
ttaccaacagaagtagattctgccacaagaaagatgttcattgaggaagtcatggagctt
gtagagctaacatcgttgagggaatcgctggtcgggctacctggcgtgaatgggctgtcg
acggagcagcgaaagaggctgactattgctgttgagctcgtcgccaacccatctataata
ttcatggacgagccaacgtctggactagatgccagggctgcagccattgtgatgagaact
gtgaggaacactgtggacactggcagaactgtggtgtgcacaatccaccagcccagtatt
gacatatttgaagcttttgatgagctgttccttatgaagagaggaggagaagaaatatac
gttggcccactgggccatcactctagccagctgatcaactactttgagggaatcaatgga
gtccgtaagataaaggatggttacaatccggcaacgtggatgttggaggtgtctagcata
gcacaggaagggattttgggggtgaatttttctgaaatatacaagaattcagatcttttc
aggagaaacaaagctctaattgcagaaatgaactcacctccccctggttccacagatctt
tacttcccatctcagtattcacagcccttcatcacacaatgcattgcctgcctatggaaa
cagcaaatgtcatactggcggaatccgccgtacactgctgtccggcttctcttcacaact
ggcatcgcattgttgcttggatcaatattctgggatcttgggtccaaaatgacttctcca
caggacctgctcaatgccttgggctccatgtatgctgcagttctcttcctcggagtgcaa
aatgcctcaacagtgcagccagttgtggctatcgaacgtactgttttctatagagagagg
gctgccgggatgtattcaggtctaccatatgcctttgcgcaggtggtggtcgagattcca
tacatctttgttcagagtgttacatatggggtcatcatctatgccatgatccaattcgaa
tggacagctgccaagttcttctggtatctcttcttcatgttcttcacattgctctatttc
acctgctacggaatgatggctgtcggcctcactcccaaccaaaacattgctgcaattgtt
tcctctgcattctatgcgctgtggaacctgtttgcaggcttcatcgttccccggcccaga
attcccatatggtggagatggtactactgggcatgcccggttgcttggaccttgtatgga
ttggtcgcttcccagttcggcgacatatccaaacggatggacaatgacatgatagtgtcg
gagttcgtgaggcaaaacttcggagtcaagcatgacttcctgggagtgattgccgctggg
atcattggatacgcagtgctctttgcattcgtcttcgccttttccattaaggtgttgaac
ttccaaagaagataa
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