Magnolia sinica: 131255643
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Entry
131255643 CDS
T09699
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
msin
Magnolia sinica
Pathway
msin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131255643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131255643
03110 Chaperones and folding catalysts [BR:
msin03110
]
131255643
03029 Mitochondrial biogenesis [BR:
msin03029
]
131255643
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msin04147
]
131255643
Enzymes [BR:
msin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
131255643
Messenger RNA biogenesis [BR:
msin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
131255643
Chaperones and folding catalysts [BR:
msin03110
]
Heat shock proteins
HSP60 / Chaperonin
131255643
Mitochondrial biogenesis [BR:
msin03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
131255643
Exosome [BR:
msin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131255643
Exosomal proteins of other body fluids (saliva and urine)
131255643
Exosomal proteins of breast cancer cells
131255643
Exosomal proteins of colorectal cancer cells
131255643
Exosomal proteins of bladder cancer cells
131255643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
131255643
NCBI-ProteinID:
XP_058112394
LinkDB
All DBs
Position
9:complement(71592913..71618063)
Genome browser
AA seq
624 aa
AA seq
DB search
MAGIYPIPFSYASNPSIRISITRSSRPSPAFNPRAMAKDIFFNHDGSATKKLQAGADMVA
ELVGVTLGPKGRNVVLENKYGPPKIVNDGETVLKEIELEDPLENVGAKLVRQAGAKTNDL
AGDGTTTSIILAQGLITEGVKVIASGMNPVQITRGIEKTAEALISELRLMSREVEDHELA
DVAAVSAGNDYIVGNMIADALRRVGKKGVVTIEKGKSIENSMQVVEGMQFDRGYLSPYFV
TDREKMAVEFHNCKLLLIDQKISNPKEMFKILDSAVKEKYPIVIVAEGIEQAALAPIIRN
KLRGVLKAAAVKAPAFGERKSHYLDDIAILTGATVIRDEAGVTLEKAGNEVLGSATKVVI
TKDSTLIVTDGSTQEAVNKRVAQIRSLVNNSEENFQKKILNERIARLSGGIAIVQVGAQT
EVELKDKKLRIEDALNATKAAIEEGVVVGGGCSLLRLSMKVDDIKERLDNEEQKIGADIF
KRALSYPSKMIAKNAGVNGNVVVEKVLSTDDIRYGYNAAKDCYEDLMAAGILDPTKVVRC
CLQHAASVAKSFLTSDVVIVDNKEQEPVRMRKPMPSSGPYYPSVECITMHSLMSSMKSAP
KHLNYSDIWLLNMVIKTNDLVGHT
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcatttatccaatcccattttcttatgcttctaatccttcaattcgcatttca
attacaagaagcagcagaccatctcctgctttcaatccaagagccatggccaaagatatc
ttcttcaaccatgatggttcagctacaaagaagctccaggcaggtgctgacatggtagca
gagctggttggtgtgactttgggtccaaaaggaaggaatgtggtgttggagaacaaatat
ggcccgccaaagattgtaaatgatggagaaactgtccttaaggagattgaattggaggat
cccttagagaatgttggtgcaaagttggtgaggcaagctggtgcgaaaaccaatgacctt
gctggtgatggtaccaccacttctattattcttgctcaaggcctaatcactgaaggtgtg
aaggttattgcttcaggcatgaatcctgttcaaattacacgtggaatcgagaagactgct
gaagcccttatttctgaactcaggttgatgtccagagaggttgaagatcatgaacttgca
gatgttgctgcagttagtgctgggaatgattacattgtaggaaatatgatagcggatgcc
cttagaagagttgggaagaagggtgtagttacaattgagaaagggaaaagcattgagaac
agcatgcaggttgtagagggaatgcagttcgatcgtggttacttgtctccttactttgtt
actgatcgagagaagatggcagtcgagtttcacaactgcaagttgcttttgattgaccaa
aaaatctcaaacccgaaggagatgtttaaaatattggacagtgcagtcaaagagaagtac
ccaattgtcatagttgcggagggcattgagcaagcagctttggctccaataatcagaaac
aaactgaggggtgtgttgaaggcagctgctgttaaagcacctgcattcggagagcgcaag
agccattacttagatgatattgctatcttgaccggagctactgtaattagagatgaggcg
ggtgtgacccttgaaaaggctgggaatgaggttttaggatctgctacgaaggtggtgata
actaaggattctacgttgattgttactgatggaagcacccaagaggccgttaacaagcga
gttgctcaaatccgaagtcttgtcaataactcggaagaaaattttcaaaagaagatactg
aatgaaaggatagcgaggctttctggtggtattgctattgttcaggtaggagcgcagaca
gaagtcgagttgaaggataaaaagctgagaattgaagatgctttgaatgcgactaaggca
gccattgaggagggagttgtggttggcggtggctgtagtctattaaggttgtcgatgaag
gtggatgatattaaggagcgcctagataatgaagagcagaagattggagccgatatcttc
aaaagggctttatcttatccttcaaaaatgatagcaaaaaatgcaggtgtaaatggcaat
gtcgttgtagaaaaggtcctgtctacagatgatatacggtacggatacaatgctgctaaa
gactgttatgaggatttgatggctgctggaattctggacccaacaaaggtagttagatgc
tgtttgcagcatgcagcctccgttgccaagagttttctcacttccgatgtggtcattgtt
gataacaaggaacaggagccggtccgaatgagaaaacccatgccaagctcaggaccctat
tatccctccgtagaatgtattacgatgcattcactcatgagttccatgaagtctgcacca
aaacatctcaactatagtgacatttggctattgaatatggtgatcaagaccaatgattta
gtgggccatacctaa
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